Bibliographic record
Abstract
A dataset containing 78985 species occurrences available in GBIF matching the query: { "and" : [ "TaxonKey is one of (Reithrodontomys megalotis saturatus, Microtus mexicanus fulviventer, Oligoryzomys delicatus tenuipes, Saimiri sciureus collinsi Osgood, 1916, Merychippus perditus (Leidy, 1858), Dinocyon gidleyi (Matthew, 1902), Mico melanoleucas Ribiero, 1912, Cervus spatulatus Thomas, 1901, Peromyscus maniculatus oreas, Nycteris aethiopica Dobson, 1878, Rhinolophus lanosus K.Andersen, 1905, Dryolestes arcuatus (Marsh, 1879), Nasua manium Thomas, 1912, Dissacus blayaci Stehlin, 1926, Notiosorex gigas (Merriam, 1897), Mesoreodon cheeki (Schlaikjer, 1934), Chalicotherium bilobatum (Cope, 1889), Pharsophorus mitis (Ameghino, 1897), Geogale aurita Milne-Edwards & A.Grandidier, 1872, Aethalops alecto (Thomas, 1923), Erophylla bombifrons (Miller, 1899), Prionailurus viverrinus (Bennett, 1833), Reithrodontomys sumichrasti (Saussure, 1861), Lemmiscus curtatus (Cope, 1868), Taeromys punicans (Miller & Hollister, 1921), Microtus pinetorum (Le Conte, 1830), Castor canadensis Kuhl, 1820, Petaurus australis Shaw, 1791, Tursiops nuuanu Andrews, 1911, Delphinus doris Gray, 1846, Elephantulus rupestris (A.Smith, 1831), Sylvicapra grimmia altivallis Heller, 1912, Sus scrofa attila Thomas, 1912, Marmota flaviventris luteola A.H.Howell, 1914, Cratogeomys zinseri (Goldman, 1939), Rhinolophus pearsonii chinensis K.Andersen, 1905, Ateles geoffroyi geoffroyi, Teleolophus magnus Radinsky, 1965, Craterogale simus Gazin, 1936, Borophagus pugnator (Cook, 1922), Osbornodon renjiei Wang, 1994, Merycodus hookwayi (Furlong, 1934), Mylohyus elmorei (White, 1942), Apternodus brevirostris Schlaikjer, 1934, Neotamias panamintinus (Merriam, 1893), Proheteromys floridanus Wood, 1932, Metanoiamys lacus (Storer, 1987), Metadjidaumo hendryi Setoguchi, 1978, Allorattus engesseri Qiu & Storch, 2000, Pappocricetodon antiquus Wang & Dawson, 1994, Chiromyoides caesor Gingerich, 1973, Parastrapotherium lemoinei Ameghino, 1894, Nycteris tragata (K.Andersen, 1912), Lasiorhinus latifrons (Owen, 1845), Plecotus balensis Kruskop & Lavrenchenko, 2000, Poiana richardsonii ochracea Thomas & Wroughton, 1907, Ichneumia albicauda dialeucos (Hollister, 1916), Sylvilagus brasiliensis kelloggi Anthony, 1923, Mustela eversmanii eversmanii, Phalanger carmelitae carmelitae, Cynomys gunnisoni gunnisoni, Pteronotus macleayii macleayii, Myotis moluccarum (Thomas, 1915), Myoxus javanicus Schinz, 1845, Choloepus napensis Lönnberg, 1922, Gaylordia mendesi Paula Couto, 1970, Mesoreodon scotti (Schlaikjer, 1934), Limnocyon velox (Marsh, 1872), Eoctodon securiclatus Ameghino, 1902, Periphragnis cristatus Roth, 1904, Paradoxurus hamiltonii Gray, 1852, Proectocion precisus Ameghino, 1904, Phascolotherium bucklandi (Broderip, 1828), Haborophocoena minutus Ichishima & Kimura, 2009, Scotophilus nigritellus de Winton, 1899, Marmosa phaea O.Thomas, 1899, Phenacomys celatus crassus Bangs, 1900, Erinaceus algirus Lereboullet, 1842, Limnocyon agilis (Marsh, 1872), Glaucomys volans nebrascensis, Hyaenodonops chapadmalensis, Brontotherium hypoceras (Cope, 1874), Lutra chinensis Gray, 1837, Erythrocebus albigenis Elliot, 1909, Crocidura marita Thomas & Hinton, 1923, Felis lynx wardi Lydekker, 1904, Rhynchocyon swynnertoni Kershaw, 1923, Neotoma mexicana ochracea, Capra ibex walie Rüppell, 1835, Epitriplopus medius (Peterson, 1934), Myotis attenboroughi Moratelli, Wilson, Novaes, Helgen & Gutiérrez, 2017, Chukimys favaloroi Barbiere et al., 2016, Heterohyus pygmaeus Sudre et al., 1990, Epieuryceros truncus Ameghino, 1889, Raricricetodon zhongtiaensis (Tong, 1997), Toxodontophanus australis (Moreno, 1882), Abrosomys agasma Shevyreva, 1984, Cynodesmus iamonensis (Sellards, 1916), Blainvillimys gemellus Vianey-Liaud, 1989, Archaeotherium zygomaticum (Troxell, 1920), Nasua mastodonta Emmert & Short, 2018, Callosciurus erythraeus thaiwanensis (Pallas, 1779), Rhinolophus sedulus K.Andersen, 1905, Sorex daphaenodon Thomas, 1907, Akodon iniscatus Thomas, 1919, Dicrostonyx unalascensis Merriam, 1900, Apomys datae (Meyer, 1899), Equus grevyi Oustalet, 1882, Perognathus parvus mollipilosus Coues, 1875, Chaetodipus arenarius mexicalis (Huey, 1939), Chaetodipus spinatus peninsulae (Merriam, 1894), Chaetodipus intermedius beardi (Weckerly, Gennaro & Best, 1988), Ratufa bicolor melanopepla Miller, 1900, Thomomys bottae sinaloae Merriam, 1901, Glyphonycteris sylvestris Thomas, 1896, Mormoops megalophylla intermedia Miller, 1900, Kerivoula lanosa lucia Hinton, 1920, Myotis nesopolus larensis LaVal, 1973, Nycticeius aenobarbus (Temminck, 1840), Phoca barbata Erxleben, 1777, Darcius duggani Rich, 1986, Geniohyus diphycus Matsumoto, 1926, Eomoropus major Zdansky, 1930, Nimravides thinobates (Macdonald, 1948), Miacis invictus Matthew & Granger, 1925, Neotragocerus improvisus Matthew & Cook, 1909, Urotrichus dolichochir (Gaillard, 1899), Centetodon chadronensis Lillegraven et al., 1981, Ottomania proavita de Bruijn et al., 2003, Schizodontomys amnicolus Korth et al., 1990, Lignimus montis Storer, 1970, Titanoides major Simons, 1960, Purgatorius unio Van Valen & Sloan, 1965, Mustela erminea semplei Sutton & Hamilton, 1932, Mustela felipei Izor & de la Torre, 1978, Genetta tigrina (Schreber, 1776), Macropus greyi Waterhouse, 1846, Alouatta palliata mexicana Merriam, 1902, Pseudaelurus intrepidus (Leidy, 1858), Tetonius mckennai Bown & Rose, 1987, Peromyscus polionotus phasma Bangs, 1898, Corynorhinus townsendii pallescens Miller, 1897, Paradoxurus hermaphroditus vellerosus Pocock, 1934, Ursus arctos californicus Merriam, 1896, Urocyon littoralis santarosae Grinnell & Linsdale, 1930, Felis margarita scheffeli Hemmer, 1974, Vulpes rueppellii rueppellii, Neotoma fuscipes fuscipes, Hapalemur griseus griseus, Gulo schlosseri Kormos, 1914, Gliruloides zhoui Wu et al., 2016, Notostylops pendens (Ameghino, 1901), Tataromys minor (Huang, 1985), Protohydrochoerus rothi Kraglievich, 1941, Anthracotherium dalmatinum (von Meyer, 1854), Munizia paranensis Kraglievich, 1931, Didelphys biforata Ameghino, 1904, Tuscahomys worlandensis Rose, Chew, Dunn, Kraus, Fricke & Zack, 2012, Pseudoplohophorus absolutus Perea, 2005, Triisodon conidens Cope, 1882, Steneofiber fossor (Peterson, 1905), Prosciurus pristinus Wang, 2008, Diodomus copei Ameghino, 1885, Asterattus longicristatus Flynn & Cheema, 1994, Ogotoma pallasi Gray, 1867, Lemniscomys striatus striatus, Mastodon floridanus (Leidy, 1886), Holochilus brasiliensis brasiliensis, Sigmodon hispidus inexoratus Elliot, 1903, Budorcas bedfordi (Thomas, 1911), Rhinolophus francisi Soisook, Struebig, Bates & Miguez, 2015, Cervus brookei Hose, 1893, Dormaalius vandenbrocki, Dasyprocta iacki Feijó & Langguth, 2013, Meriones crassus sacramenti, Colobus leucomerus Ogilby, 1838, Peromyscus crinitus disparilis Goldman, 1932, Putorius nivalis ibericus Barrett-Hamilton, 1900, Sigmodon hispidus obvelatus Russell, 1952, Dendrolagus goodfellowi shawmayeri Rothschild & Dollamn, 1936, Rattus rattus pelengensis Sody, 1941, Canis lateralis Sclater, 1870, Macaca arctoides arctoides, Aethomys hindei algazal, Tupaia everetti Thomas, 1892, Rattus tanezumi exsul, Tetraclaenodon pliciferus (Cope, 1882), Protohippus proplacidus (Osborn, 1918), Hoplophorus compressus (Ameghino, 1882), Cynodictis lacustris Gervais, 1852, Eliomys quercinus helleri Janossy, 1962, Sagmatias australis (Peale, 1849), Amphimeryx riparius Aymard, 1855, Ptilodus gracilis (Gidley), Epomophorus angolensis Gray, 1870, Emballonura alecto (Eydoux & Gervais, 1836))", "HasCoordinate is true" ] } The dataset includes 78985 records from 186 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0194579-200613084148143/datasets/export for details. Data from some individual datasets included in this download may be licensed under less restrictive terms.
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.001 | 0.005 |
| Meta-epidemiology (narrow) | 0.002 | 0.001 |
| Meta-epidemiology (broad) | 0.002 | 0.002 |
| Bibliometrics | 0.007 | 0.010 |
| Science and technology studies | 0.001 | 0.000 |
| Scholarly communication | 0.004 | 0.003 |
| Open science | 0.003 | 0.004 |
| Research integrity | 0.002 | 0.002 |
| Insufficient payload (model declined to judge) | 0.334 | 0.443 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".