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Record W4396329085 · doi:10.15468/dl.hbamer

Occurrence Download

2021· dataset· en· W4396329085 on OpenAlexaboutno aff

Bibliographic record

VenueGlobal Biodiversity Information Facility · 2021
Typedataset
Languageen
FieldEnvironmental Science
TopicEnvironmental DNA in Biodiversity Studies
Canadian institutionsnot available
Fundersnot available
KeywordsDownloadComputer scienceWorld Wide Web

Abstract

fetched live from OpenAlex

A dataset containing 17447 species occurrences available in GBIF matching the query: { "and" : [ "Country is Canada", { "or" : [ "TaxonKey is Stratiotes aloides L.", "TaxonKey is Ciona intestinalis (Linnaeus, 1767)", "TaxonKey is Styela clava Herdman, 1881", "TaxonKey is Ascidiella aspersa (Müller, 1776)", "TaxonKey is Botryllus schlosseri (Pallas, 1766)", "TaxonKey is Botrylloides violaceus Oka, 1927", "TaxonKey is Cabomba caroliniana A.Gray", "TaxonKey is Caprella mutica Schurin, 1935", "TaxonKey is Carassius auratus (Linnaeus, 1758)", "TaxonKey is Ctenopharyngodon idella (Valenciennes, 1844)", "TaxonKey is Cyprinus carpio Linnaeus, 1758", "TaxonKey is Carassius gibelio (Bloch, 1782)", "TaxonKey is Trapa natans Thunb.", "TaxonKey is Bythotrephes longimanus Leydig, 1860", "TaxonKey is Codium fragile subsp. fragile", "TaxonKey is Eriocheir sinensis H.Milne Edwards, 1853", "TaxonKey is Hemigrapsus sanguineus (De Haan, 1835)", "TaxonKey is Carcinus maenas (Linnaeus, 1758)", "TaxonKey is Lepomis cyanellus Rafinesque, 1819", "TaxonKey is Hemimysis anomala G.O.Sars, 1907", "TaxonKey is Dikerogammarus villosus (Sowinsky, 1894)", "TaxonKey is Didemnum vexillum Romanov, 1989", "TaxonKey is Diplosoma listerianum (Milne Edwards, 1841)", "TaxonKey is Orconectes rusticus (Girard, 1852)", "TaxonKey is Procambarus virginalis Lyko, 2017", "TaxonKey is Egeria densa Planch.", "TaxonKey is Nymphoides peltata (S.G.Gmel.) Kuntze", "TaxonKey is Scardinius erythrophthalmus (Linnaeus, 1758)", "TaxonKey is Neogobius melanostomus (Pallas, 1814)", "TaxonKey is Hydrilla verticillata C.Presl, 1845", "TaxonKey is Hydrocharis morsus-ranae L.", "TaxonKey is Eichhornia crassipes (Mart.) Solms", "TaxonKey is Pistia stratiotes L.", "TaxonKey is Membranipora membranacea (Linnaeus, 1767)", "TaxonKey is Dreissena bugensis (Andrusov, 1897)", "TaxonKey is Dreissena polymorpha (Pallas, 1771)", "TaxonKey is Myriophyllum spicatum L.", "TaxonKey is Myriophyllum aquaticum (Vell.) Verdc.", "TaxonKey is Potamopyrgus antipodarum (J.E.Gray, 1843)", "TaxonKey is Corbicula fluminalis (O.F.Müller, 1774)", "TaxonKey is Echinogammarus ischnus (Stebbing, 1899)", "TaxonKey is Phragmites australis Cav.", "TaxonKey is Channa argus (Cantor, 1842)", "TaxonKey is Potamogeton crispus L.", "TaxonKey is Cercopagis pengoi (Ostroumov, 1891)", "TaxonKey is Tinca tinca (Linnaeus, 1758)", "TaxonKey is Cipangopaludina chinensis (Griffith & Pidgeon, 1865)", "TaxonKey is Viviparus georgianus (I.Lea, 1834)", "TaxonKey is Butomus umbellatus L.", "TaxonKey is Didymosphenia geminata var. curvata Skvortzow & Meyer, 1928", "TaxonKey is Gymnocephalus cernuus (Linnaeus, 1758)", "TaxonKey is Lythrum salicaria L." ] } ] } The dataset includes 17447 records from 116 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001850-210914110416597/datasets/export for details. Data from some individual datasets included in this download may be licensed under less restrictive terms.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.006
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.689
Threshold uncertainty score0.982

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.006
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0070.012
Science and technology studies0.0010.000
Scholarly communication0.0040.004
Open science0.0030.004
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.3110.436

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.199
Teacher spread0.187 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2021
Admission routes1
Has abstractyes

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