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Record W4396515559 · doi:10.22215/etd/2023-15979

Electrical Impedance Spectroscopy with Multi-modal Tissue Discrimination for Ultrasound-Guided Targeted Biopsy

2023· dissertation· en· W4396515559 on OpenAlexaff
C. McDermott

Bibliographic record

Venuenot available
Typedissertation
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicSpectroscopy Techniques in Biomedical and Chemical Research
Canadian institutionsCarleton University
Fundersnot available
KeywordsBiopsySampling (signal processing)UltrasoundRadiologyProstate cancerMagnetic resonance imagingMedicineBiomedical engineeringCancerComputer scienceComputer vision

Abstract

fetched live from OpenAlex

Prostate cancer (PCa) diagnosis has undergone a dramatic evolution in recent years.Men with clinical risk factors and important lesions observed via magnetic resonance imaging (MRI) typically undergo a targeted biopsy.In a typical prostate biopsy procedure, the operator uses ultrasound (US) imaging to place a biopsy needle in the lesion(s) identified pre-operation via MRI for sampling.Since the lesion is not always visible in US, there is no way to ascertain that the needle is correctly placed in the lesion before sampling.Thus, negative biopsy results occur often and lead to uncertainty in treatment decisions.This thesis proposes an instrumented needle probe that uses electrical impedance spectroscopy and algorithms to identify the tissue at the needle tip in real-time based on the tissue's bioelectrical properties.A new probe is designed, constructed, and validated on a collected dataset of ex-vivo tissue samples.Two data augmentation methods are proposed to improve the performance of tissue classification algorithms running on small datasets.Lastly, the thesis shows that US waves induce an electric potential in the tissue, which can be effectively measured with the sensorised needle and may provide additional information to classify the tissue.In the future, the use of the sensorised needle for tissue identification could improve confidence in biopsy results, and reduce procedure time and number of biopsies performed.i Components of Chapter 2, at time of writing, are under review as: C. McDermott, H. Asilian-

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.372
Teacher spread0.355 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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Same topicSpectroscopy Techniques in Biomedical and Chemical ResearchFrench-language works237,207