MétaCan
Menu
Back to cohort
Record W4396541815 · doi:10.1101/cshperspect.a041449

Niche Theory as an Underutilized Resource for the Study of Adaptive Radiations

2024· review· en· W4396541815 on OpenAlexaff
Rachel M. Germain, Blake Matthews, Luke J. Harmon

Bibliographic record

VenueCold Spring Harbor Perspectives in Biology · 2024
Typereview
Languageen
FieldEngineering
TopicRadiative Heat Transfer Studies
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsBiologyNicheResource (disambiguation)EcologyEnvironmental resource managementComputer science

Abstract

fetched live from OpenAlex

Biologists are often stuck between two opposing questions: Why are there so many species and why are there not more? Although these questions apply to the maintenance of existing species, they equally apply to the formation of new ones. The more species specialize in terms of their niches, the more opportunities arise for new species to form and coexist in communities. What sets an upper limit to specialization, thus setting an upper limit to speciation? We propose that MacArthur's theories of species packing and resource minimization may hold answers. Specifically, resources and individuals are finite-as species become increasingly specialized, each individual has fewer resources it can access. Species can only be as specialized as is possible in a given resource environment while still meeting basic resource requirements. We propose that the upper limit to specialization lies below the threshold that causes populations to be so small that stochastic extinctions take over, and that this limit is likely rarely approached due to the sequential timing by which new lineages arrive.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.003
Threshold uncertainty score0.018

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.004
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0030.003
Science and technology studies0.0010.006
Scholarly communication0.0020.006
Open science0.0020.002
Research integrity0.0030.007
Insufficient payload (model declined to judge)0.0030.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.071
GPT teacher head0.365
Teacher spread0.295 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2024
Admission routes1
Has abstractyes

Explore more

Same venueCold Spring Harbor Perspectives in BiologySame topicRadiative Heat Transfer StudiesFrench-language works237,207