Kidney Disease in the Caribbean-APOL1 Risk Alleles and Emerging Environmental Stressors
Bibliographic record
Abstract
The English-Speaking Caribbean comprises of eight million persons predominantly of African descent, unified by a shared history of European (mainly British) colonization spanning centuries. Although most individual countries are now designated high- and middle-income sociodemographic index, lack of human and infrastructural resources, geopolitical stasis, and emerging climate stressors contribute to inequities in health care. Data on the epidemiology, causes, and outcomes of kidney disease in the region are sparse, limited largely to single-center studies and a voluntary registry effort undermined in its reach and sustainability by lack of centralized support (Table 1).Table 1Summary of ascribed causes of end-stage kidney diseaseˆUnpublished Caribbean Renal Registry data from Dr. Soyibo . by CountryCountryHypertension (%)Diabetes mellitus (%)Bahamas2628Barbados5627British Virgin Islands7026Cayman Islands4229Jamaica5021Trinidad and Tobago2925ˆ Unpublished Caribbean Renal Registry data from Dr. Soyibo . Open table in a new tab Absent any systematic data, we integrate historical context with available population ancestry data to posit that the recent advances in APOL1 high risk genotype and emerging therapeutics could be highly applicable to the population living in the region. We also highlight environmental exposures enriched in this region, investigations into which could offer new insights into the development and progression of both APOL1 and non APOL1 related kidney disease. Although there were indigenous populations present before the start of the transatlantic slave trade in the English-speaking Caribbean, most of the population from several islands including Jamaica now has West African roots. The Caribbean received about one half of all Africans brought to the Americas during the transatlantic slave trade;1Demographic Change and Population Movement. Chapter 8 In Laurence K, Cuesta J. General History of the Caribbean: The Long Nineteenth Century: Nineteenth-Century Transformations.; 2011.Google Scholar almost four-fold as many enslaved people disembarked in Caribbean compared to the rest of North America (Figure 1). About 2.6 million enslaved African persons were brought to the British Caribbean (about 23% of the transatlantic slave trade).1Demographic Change and Population Movement. Chapter 8 In Laurence K, Cuesta J. General History of the Caribbean: The Long Nineteenth Century: Nineteenth-Century Transformations.; 2011.Google Scholar Since the latter part of the seventeenth century the Caribbean has been mainly populated by people of African descent (Supplemental Table 1).1Demographic Change and Population Movement. Chapter 8 In Laurence K, Cuesta J. General History of the Caribbean: The Long Nineteenth Century: Nineteenth-Century Transformations.; 2011.Google Scholar A majority of the indigenous inhabitants of the Caribbean suffered from infections, violence, and slavery during the colonial period, and their numbers have since dwindled to a minority across the Caribbean.2Knight F. The Caribbean: The Genesis of a Fragmented Nationalism.; 2011.Google Scholar There is some heterogeneity among the islands however: parts of the Caribbean (e.g., Trinidad and Tobago) received relatively fewer numbers of enslaved persons from Africa, and host a larger proportion of persons trafficked from the Indian subcontinent. The emancipation of enslaved persons in 1838 within the British Colonial Empire counterintuitively led to disenfranchisement of the Black majority, increasing poverty, and social injustices. Despite no longer being under colonial rule, the emancipated Caribbean still operated under the old imperial system with a small minority of White Caribbeans continuing to retain control. Black Caribbeans from different social strata were forced to build new connections in an attempt to form a new collective consciousness. In many ways, the struggle to create independent states was far ahead of the forging of national identities.2High rates of infectious diseases and infant mortality occurred. Health care policies generated were from the purview of the anti-black biases of then leadership, therefore “ad hoc” or piece-meal whilst not systematically addressing underlying the social and economic inequities. In the post-colonial era, newly formed governments were now faced with generating policy responses after centuries of neglect, in addition to dealing with an uncertain economic and political future in the absence of British rule. Although health care policy gains have been made in the decades following independence, particularly in the control of infectious disease and maternal health and nutrition, a legacy of reactionary policy making persists. Stagnation of economic growth, social and political unrest in the years after independence, led to lack of funding and investment in health care systems. Further compounding these issues are loss of skilled medical personnel due to migration, continued debt to international bodies, and small island environmental vulnerabilities. These factors have influence on non-communicable disease burden. In the case of kidney disease, both lack of specific policy and health care resources may underlie the inequities in kidney care which are evident to nephrologists practicing in the region, many of whom have trained in the US, UK or Canada. For example, although the prevalence of the major risk factor for kidney disease (type 2 diabetes) is similar in the Caribbean and US and Canada, the prevalence of treated kidney failure is lower in the Caribbean, implying lack of access.3Bello AK, McIsaac M, Okpechi IG, Johnson DW, Jha V, Harris DCH, Saad S, Zaidi D, Osman MA, Ye F, Lunney M, Jindal K, Klarenbach S, Kalantar-Zadeh K, Kovesdy CP, Parekh RS, Prasad B, Khan M, Riaz P, Tonelli M, Wolf M, Levin A; ISN North America and the Caribbean Regional Board. International Society of Nephrology Global Kidney Health Atlas: structures, organization, and services for the management of kidney failure in North America and the Caribbean. Kidney Int Suppl (2011). 2021 May;11(2):e66-e76. doi: 10.1016/j.kisu.2021.01.001. Epub 2021 Apr 12. PMID: 33981472; PMCID: PMC8084729.Google Scholar These inequities remain unquantified, however, and therefore could be argued are easier to neglect. Unlike in many high-income and even in some comparably middle-income countries (e.g., Thailand), where national surveillance studies integrate kidney function evaluations and/or maintain a separate national registry mandated to capture data on all patients receiving renal replacement therapy, the English-speaking Caribbean lacks any systematic data collection efforts related to kidney disease. Prior efforts for a Caribbean renal registry have faced challenges due to lack of public funding to sustain these efforts; the registry last reported data in 2011 (Table 1). The voluntary, decentralized nature of this effort has undermined its sustainability, especially during the pressures of the COVID-19 pandemic. The lack of investment in kidney health epidemiological surveillance may have important implications for kidney health in the Caribbean. The historical colonization of the region implies that the Caribbean region will host among the highest prevalence of people with APOL1 high risk genotype in the Western hemisphere. Yet sparse population-based data exist to estimate the prevalence of APOL1 high-risk alleles and associated kidney disease in the Caribbean. A single genomic investigation drawing on data from the Population Architecture using Genomic Study (PAGE) and the Consortia on Asthma on African-Ancestry populations of the Americas (CAAPA) assessed high-risk alleles in 111 global populations. 4Nadkarni G.N. Gignoux C.R. Sorokin E.P. et al.Worldwide Frequencies of APOL1 Renal Risk Variants.N Engl J Med. 2018; 379: 2571-2572https://doi.org/10.1056/NEJMc1800748Crossref PubMed Scopus (59) Google Scholar This study consisted of 58,297 individuals in total (the numbers sampled from the Caribbean are unknown), and estimated prevalence of APOL1 high-risk alleles of 10 to 22% in populations from Jamaica and Barbados.4Nadkarni G.N. Gignoux C.R. Sorokin E.P. et al.Worldwide Frequencies of APOL1 Renal Risk Variants.N Engl J Med. 2018; 379: 2571-2572https://doi.org/10.1056/NEJMc1800748Crossref PubMed Scopus (59) Google Scholar A small study evaluated APOL1 high-risk alleles in 33 potential kidney donors from Antigua & Barbuda versus Nigeria. The prevalence of homozygous G1, G2 or compound homozygous genotype was 42% in potential donors from Antigua & Barbuda and 43% in Nigeria, indicating likely high but severely underrecognized contribution of APOL1 high risk alleles to kidney disease. Currently there are 3 active (Phase I-II) clinical trials investigating medications to treat APOL1 nephropathy. A Phase 1 study is examining the pharmacokinetics of drug AZD2373—designed to reduce APOL1 production—among healthy, male participants of West African ancestry (NCT05351047). A second Phase 2 study aims to determine the safety and efficacy of the repurposing drug baricitinib (JAK1 and JAK2 inhibitor) in reducing albuminuria in individuals with APOL1 associated FSGS and CKD due to hypertension (NCT05237388). Recently, Egbuna et al. detailed results of a Phase 2a clinical trial of a small molecule drug, Inaxaplin, for biopsy-proven FSGS in patients with the high-risk genotype. The analysis found an 44% reduction in proteinuria after 13 weeks of treatment.5Egbuna O. Zimmerman B. Manos G. et al.Inaxaplin for Proteinuric Kidney Disease in Persons with Two APOL1 Variants.N Engl J Med. 2023; 388: 969-979https://doi.org/10.1056/NEJMoa2202396Crossref PubMed Scopus (42) Google Scholar These promising treatments are potentially highly relevant to the residents of the Caribbean region. For example, in Jamaica, 79% of 2.82 million population is above age 15 years and 78% in turn are of African descent.6World Bank Group – “International Development, Poverty, & Sustainability. World Bank.” https://www.worldbank.org/en/home. Last accessed 7/4/23Google Scholar From estimates in the US and West Africa—13% of African Americans have two APOL1 high-risk alleles7,S1 and in certain ethnic groups in Nigeria (Yoruba ethnic group) the population prevalence exceeds 25%—we can estimate that 225,898 to 434,421 persons over 15 years of age may carry two high-risk APOL1 alleles in Jamaica. This type of estimation provides support for, but does not replace, the critical need to assess the prevalence of APOL1 high risk alleles in large population-based studies in the Caribbean (Table 2 outlines some priority approaches). Also critical is to study the association of these alleles with incident kidney disease, since this may differ from the risk experienced by African Americans and since a large proportion of ESKD in the English-speaking Caribbean is being attributed to hypertension as of the registry effort (Table 1). The Caribbean hosts a vulnerable population with increasing rates of heat stress, air pollution, and viral exposures, all of which are potentially de novo causes of kidney disease but may also mediate APOL1 kidney disease.8Kshirsagar A.V. Zeitler E.M. Weaver A. Franceschini N. Engel L.S. Environmental Exposures and Kidney Disease.Kidney360. 2022; 3: 2174-2182https://doi.org/10.34067/KID.0007962021Crossref Scopus (7) Google Scholar,10Di Napoli C. Allen T. Méndez-Lázaro P.A. Pappenberger F. Heat stress in the Caribbean: Climatology, drivers, and trends of human biometeorology indices.Int J Climatol. 2023; 43: 405-425https://doi.org/10.1002/joc.7774Crossref Scopus (13) Google Scholar These environmental pollutants could play a role as second hits in APOL1 nephropathy since not every person with the APOL1 high risk genotype develops kidney disease. Of the APOL1 associated viral risk factors, HIV appears to be the most prevalent, with the Caribbean being second to Africa with an adult prevalence rate between 1.9-3.1%, and an estimated 29,000 (1.6%) of persons living with HIV in Jamaica.9Mosquito borne viruses such as dengue and zika viruses have been associated with acute kidney disease and glomerulonephritis, with case reports of collapsing FSGS .11Araújo S. de A. Cordeiro T.M.E. Belisário A.R. et al.First report of collapsing variant of focal segmental glomerulosclerosis triggered by arbovirus: dengue and Zika virus infection.Clin Kidney J. 2019; 12: 355-361https://doi.org/10.1093/ckj/sfy104Crossref Scopus (17) Google Scholar Heavy rainfall in various Caribbean islands have been linked with increased rates of Dengue fever .12The kidney health effects of these viruses endemic to the Caribbean are understudied, and may be a direction for further study (Table 2). A range of heavy metals inclusive of cadmium, lead, mercury are common water and soil contaminants in the Caribbean. These elements have been linked with incident CKD and kidney failure in worldwide observational studies.13Ferraro PM, Costanzi S, Naticchia A, Sturniolo A, Gambaro G. Low level exposure to cadmium increases the risk of chronic kidney disease: analysis of the NHANES 1999-2006. BMC Public Health. 2010;10:304. doi:10.1186/1471-2458-10-304Google Scholar,14A. Fevrier-Paul, A. Soyibo, N. de Silva, S. et al, Trace elements and chronic kidney disease: a cross-sectional study from Jamaica, Nephrology, vol. July, pp. 79–90, 2021Google Scholar Jamaica has a high concentration of Cadmium (Cd) in the island’s soil reserves, with concentrations as high as 409mg/kg, and mean concentration of 20mg/kg of soil, approximately 100 times the world average (0.2mg/kg). Furthermore, high levels of cadmium were found in the livers and kidneys of Jamaican adults in an autopsy series and in locally grown fruits and vegetables.14The role of cadmium in CKD in the Caribbean is unclear. In a cross-sectional analysis using data from 5426 participants from the National Health and Nutrition Examination Surveys (NHANES), elevated serum cadmium levels (>1mcg/g) were associated with an ∼50% increased risk of reduced eGFR (<60ml/min/1.73m2) and ∼40% increased risk of albuminuria.13Ferraro PM, Costanzi S, Naticchia A, Sturniolo A, Gambaro G. Low level exposure to cadmium increases the risk of chronic kidney disease: analysis of the NHANES 1999-2006. BMC Public Health. 2010;10:304. doi:10.1186/1471-2458-10-304Google Scholar In a small cross-sectional study of 96 Jamaican residents attending outpatient medical clinics with and without CKD, high measured levels of the trace elements strontium, lead, and arsenic were negatively correlated with estimated GFR, however there was no association with cadmium and eGFR.15The potential role of distinctly enriched elements and their potential causative role in CKD provides another opportunity for novel investigations in the Caribbean. The story of APOL1 nephropathy evinces the benefits of careful elucidation of epidemiology and cause of kidney disease in diverse populations. Promising pathways to targeted treatments now exist. Although the current data on kidney disease prevalence, cause, and outcomes are sparse in the English-speaking Caribbean, kidney disease is commonly attributed to hypertension in this region. Based on historical migration patterns, persons self-identifying as Black living in the English-Speaking Caribbean are likely to have significant West African biological ancestry.1Demographic Change and Population Movement. Chapter 8 In Laurence K, Cuesta J. General History of the Caribbean: The Long Nineteenth Century: Nineteenth-Century Transformations.; 2011.Google Scholar, The distinctive environmental and infectious exposures of this island-living population can potentially offer new insights into for the expression of APOL1 disease specifically but also of kidney disease broadly. Studying these exposures and genetic frequency of APOL1 high risk alleles in the Caribbean can build rationale for ethical inclusion of persons living in the Caribbean, a region with potentially the highest absolute numbers of affected persons in North America, in treatment programs aimed at APOL1 nephropathy.
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How this classification was reachedexpand
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.005 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.001 |
| Insufficient payload (model declined to judge) | 0.000 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one teacher head, not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".