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Record W4396856583 · doi:10.7554/elife.96446.1

Non-autonomous cell redox-pairs dictate niche homeostasis in multi-lineage stem populations

2024· preprint· en· W4396856583 on OpenAlexfundno aff
Olivia Majhi, Aishwarya Chhatre, Tanvi Chaudhary, Devanjan Sinha

Bibliographic record

VenueeLife · 2024
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRedox biology and oxidative stress
Canadian institutionsnot available
FundersScience and Engineering Research BoardUniversity of TorontoDepartment of Science and Technology, Ministry of Science and Technology, IndiaYork University
KeywordsNicheLineage (genetic)Stem cellHomeostasisBiologyEvolutionary biologyCell biologyStem cell nicheEcologyGeneticsProgenitor cellGene

Abstract

fetched live from OpenAlex

Abstract Reactive oxygen species (ROS), predominantly derived from mitochondrial respiratory complexes, have evolved as key molecules influencing cell fate decisions like maintenance and differentiation. These redox-dependent events are mainly considered to be cell intrinsic in nature, on contrary our observations indicate involvement of these oxygen-derived entities as intercellular communicating agents. In multi-lineage Drosophila germline, neighbouring Germline Stem Cells (GSCs) and Cystic Stem Cells (CySCs) maintain differential redox thresholds where CySCs by virtue of their higher redox-state regulate physiological ROS levels of germline. Disruption of the intercellular redox equilibrium between the two adjoining stem cell populations results in deregulated niche architecture and loss of GSCs, which was mainly attributed to loss of contact-based receptions and uncontrolled CySC proliferation due to ROS-mediated activation of self-renewing signals. Our observations hint towards the crucial role of intercellular redox gradients originating from somatic progenitors, CySCs in niche stability where they function not only as a source of their own maintenance cues but also serve as non-autonomous redox moderators of germline immortality. Our findings underscore the complexity of niche homeostasis and predicate the importance of intercellular redox communication in understanding stem cell microenvironments.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.035
GPT teacher head0.310
Teacher spread0.275 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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