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Record W4397045251 · doi:10.1681/asn.20233411s1695a

Inhibition of ATP-Citrate Lyase Improves CKD Through Multiple Mechanisms

2023· article· en· W4397045251 on OpenAlexaff
Kian S. O'Neil, Zeel Patel, Asfia Soomro, Russta Fayyazi, Jackie Trink, Bo Gao, Melissa Macdonald, Joan C. Krepinsky

Bibliographic record

VenueJournal of the American Society of Nephrology · 2023
Typearticle
Languageen
FieldMedicine
TopicDiet, Metabolism, and Disease
Canadian institutionsMcMaster University
Fundersnot available
KeywordsATP citrate lyaseLyaseChemistryMedicineInternal medicineBiochemistryEndocrinologyEnzymeCitrate synthase

Abstract

fetched live from OpenAlex

Background: ATP-citrate lyase (ACLY), upregulated in chronic kidney disease (CKD), catalyzes the synthesis of acetyl-coA from citrate. Acetyl-CoA is a vital precursor for lipid synthesis and histone acetylation that regulates gene expression. In kidney cells, ACLY regulates fibrogenic, lipogenic and inflammatory gene expression; its inhibition reduced fibrosis in the unilateral ureteral obstruction (UUO) model. The ACLY metabolic by-product malonyl-coA, however, is also an important inhibitor of fatty acid oxidation (FAO), and defective FAO in proximal tubular epithelial cells (PTEC) is now established as a major contributor to fibrosis. Here we tested the efficacy of a novel ACLY inhibitor (ACLYi) on reducing fibrosis and its potential role in improving FAO in UUO. Methods: 8-week-old male C57BL/6J mice underwent UUO surgery and were treated orally with an ACLY inhibitor (Espervita Therapeutics) for 10 days. Kidneys were assessed by immunohistochemistry, immunoblotting and RNAseq. Effects of ACLYi were tested on the HK2 PTEC cell line and primary renal fibroblast responses to TGFβ1 (5ng/ml, 48h), a cytokine known to promote fibrosis and reduce FAO. Lipid accumulation was assessed by Oil Red O staining and LC/MS analysis. Results: ACLYi significantly and dose-dependently decreased fibrosis in the UUO model determined by trichrome, PSR, fibronectin and α-smooth muscle actin (SMA) expression. ACLYi decreased macrophage (F4/80) infiltration including that of the profibrotic M2 phenoype marked by CD206. RNAseq analysis showed upregulation of FAO-related hallmark pathways and reduction in inflammation pathways with ACLYi. Defective FAO is known to result in PTEC apoptosis and lipid accumulation. ACLYi reduced both apoptosis, as assessed by the presence of cleaved caspase 3, as well as lipid accumulation, with a particular decrease in cholesteryl esters. In HK2 cells and renal fibroblasts, TGFβ1-induced fibrotic protein expression was inhibited by ACLYi, and lipid accumulation was reduced in PTEC. Conclusions: ACLYi reduced renal fibrosis, apoptosis and lipid accumulation in UUO mice. ACLYi also prevented profibrotic responses to TGFβ1 in PTEC and fibroblasts. Current studies are ongoing to confirm beneficial effects on restoring FAO. Funding: Commercial Support - Espervita Therapeutics, Government Support - Non-U.S.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.287
Teacher spread0.266 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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