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Record W4399185919 · doi:10.3897/zse.100.123441

The missing piece of the puzzle: A new and widespread species of the genus Rhynchocalamus Günther, 1864 (Squamata, Colubridae) from the Arabian Peninsula

2024· article· en· W4399185919 on OpenAlexaff
Fulvio Licata, Lukáš Pola, Jiřı́ Šmı́d, Adel A. Ibrahim, André Vicente Liz, Bárbara Santos, László Patkó, Ayman Abdulkareem, Duarte V. Gonçãlves, Ahmed Mohajja Alshammari, Salem Busais, Damien M. Egan, Ricardo Oliveira Ramalho, Josh Smithson, José Carlos Brito

Bibliographic record

VenueZoosystematics and Evolution · 2024
Typearticle
Languageen
FieldEnvironmental Science
TopicAmphibian and Reptile Biology
Canadian institutionsInnovation Cluster (Canada)
FundersFundação para a Ciência e a TecnologiaMuséum National d'Histoire NaturelleGrantová Agentura České RepublikyUniverzita Karlova v PrazeNorthwestern University
KeywordsIUCN Red ListSquamataGenusPeninsulaColubridaeRange (aeronautics)EcologyThreatened speciesGeographyEndemismHabitatBiologyEndangered speciesZoology

Abstract

fetched live from OpenAlex

Discovery rates of new species are uneven across taxonomic groups and regions, with distinctive and widely distributed species being more readily described than species with secretive habits. The genus Rhynchocalamus includes five species of secretive snakes distributed from Egypt eastwards to Iran, including the Arabian Peninsula. A wide biogeographic gap exists within the genus, which separates R. dayanae found in south Israel from R. arabicus, which occurs in the coastal areas of south Yemen and Oman. We describe Rhynchocalamus hejazicussp. nov., a small, secretive snake, with a distinctive colouration and a melanistic morph. The new species occurs in the northwestern Hejaz region of the Kingdom of Saudi Arabia (KSA) and fills a large part of the existing distribution gap of the genus in the Arabian Peninsula. Molecular analyses of mitochondrial (12S, 16S, cytb) and nuclear genes (cmos, MC1R, NT3, RAG1) indicate that R. hejazicussp. nov. is closely related to R. dayanae and R. arabicus, but uncertainty on the deep relationship within the genus remains. The new species has a large distribution range which potentially includes other regions in Jordan and KSA, and is associated with mountainous areas with cold wet seasons. Furthermore, it inhabits sandy and stony soils with varying vegetation cover and can be found in anthropogenically disturbed habitats, suggesting that the species should not be categorised as threatened according to IUCN criteria. The discovery of such a distinctive species highlights the existing gap in the description of rare and secretive species, and the need to enhance sampling efforts and monitoring strategies to fully capture species diversity in unexplored areas.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0020.003
Scholarly communication0.0010.002
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.197
Teacher spread0.188 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2024
Admission routes1
Has abstractyes

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