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Record W4399200646 · doi:10.1093/braincomms/fcae190

Investigation of the genetic aetiology of Lewy body diseases with and without dementia

2024· article· en· W4399200646 on OpenAlexfundno aff
Lesley Wu, Raquel Real, Alejandro Martínez-Carrasco, Ruth Chia, Michael Lawton, Maryam Shoai, Catherine Bresner, Cornelis Blauwendraat, Andrew Singleton, Mina Ryten, Yevgeniya Abramzon, Sarah Ahmed, Camille Alba, Marilyn S. Albert, Dagmar Bačíková, Matthew J. Barrett, Thomas G. Beach, David A. Bennett, Lilah M. Besser, Eileen H. Bigio, Bradley F Boeve, Ryan C. Bohannan, Chad A. Caraway, Jose‐Alberto Palma, Clifton L. Dalgard, Dennis W. Dickson, Kelley Faber, Tanis J. Ferman, Luigi Ferrucci, Margaret E. Flanagan, Tatiana Foroud, Bernardino Ghetti, J. Raphael Gibbs, Alison Goate, David B. Goldstein, Neill R Graff-Radford, Heng-Chen Hu, Daniel Hupalo, Scott M. Kaiser, Horacio Kaufmann, Ronald C. Kim, Gregory Klein, Walter A. Kukull, Amanda B Kuzma, James B. Leverenz, Grisel Lopez, Qinwen Mao, Elisa Martinez-McGrath, Eliezer Masliah, Ed Monuki, Kathy L. Newell, Lucy Norcliffe‐Kaufmann, Matthew Perkins, Olga Pletnikova, Alan E. Renton, Susan M. Resnick, Owen A. Ross, Marya S. Sabir, Clemens R. Scherzer, Sonja W. Scholz, Geidy E. Serrano, Vikram Shakkotai, Ellen Sidransky, Andrew B. Singleton, Toshiko Tanaka, Nahid Tayebi, Bryan J. Traynor, Juan C. Troncoso, Coralie Viollet, Ronald L. Walton, Randy Woltjer, Zbigniew K. Wszołek, Sandra E. Black, Ziv Gan‐Or, Julia Keith, Mario Masellis, Ekaterina Rogaeva, Dag Aarsland, Safa Al‐Sarraj, Johannes Attems, Raffaele Ferrari, Steve Gentleman, John Hardy, Angela Hodges, Seth Love, Ian G. McKeith, Christopher M. Morris, Huw R. Morris, Stuart Pickering‐Brown, Regina H. Reynolds, Alan Thomas, Bension S. Tilley, Claire Troakes, Francesca Brett, Alexis Brice, Charles Duyckaerts, Suzanne Lesage, Maura Brunetti, Andrea Calvo, Antonio Canosa, Adriano Chiò, Gianluca Floris, Giancarlo Logroscino, Chiara Zecca, Jordi Clarimón, Mónica Díez-Fairén, Juan Fortea, Isabel González Aramburu, Jon Infante, Carmen Lage, Alberto Lleó, Pau Pástor, Laura Porcel-Molina, Eloy Rodríguez‐Rodríguez, Pascual Sánchez‐Juan, Rejko Krüger, Patrick May, Georgia Xiromerisiou, Nigel Williams, Yoav Ben‐Shlomo, Donald G. Grosset

Bibliographic record

VenueBrain Communications · 2024
Typearticle
Languageen
FieldMedicine
TopicDiet and metabolism studies
Canadian institutionsnot available
FundersNational Institute on AgingOtsuka Pharmaceutical Development and CommercializationNational Institutes of HealthNIHR Oxford Biomedical Research CentreMauritius Research CouncilMedical Research Council CanadaEdmond J. Safra Philanthropic FoundationParkinson's UKUniversity of OxfordNational Institute of Neurological Disorders and StrokeVerily Life SciencesNational Institute for Health and Care ResearchAligning Science Across Parkinson’sUniversity College LondonMedical Research CouncilCelgeneNHS Greater Glasgow and ClydePfizerMichael J. Fox Foundation for Parkinson's ResearchFoundation for the National Institutes of Health
KeywordsLewy bodyEtiologyDementiaDementia with Lewy bodiesMedicineNeurosciencePsychologyPsychiatryDiseasePathology

Abstract

fetched live from OpenAlex

Abstract Up to 80% of Parkinson's disease patients develop dementia, but time to dementia varies widely from motor symptom onset. Dementia with Lewy bodies presents with clinical features similar to Parkinson’s disease dementia, but cognitive impairment precedes or coincides with motor onset. It remains controversial whether dementia with Lewy bodies and Parkinson's disease dementia are distinct conditions or represent part of a disease spectrum. The biological mechanisms underlying disease heterogeneity, in particular the development of dementia, remain poorly understood, but will likely be the key to understanding disease pathways and, ultimately, therapy development. Previous genome-wide association studies in Parkinson's disease and dementia with Lewy bodies/Parkinson's disease dementia have identified risk loci differentiating patients from controls. We collated data for 7804 patients of European ancestry from Tracking Parkinson’s, The Oxford Discovery Cohort, and Accelerating Medicine Partnership—Parkinson's Disease Initiative. We conducted a discrete phenotype genome-wide association study comparing Lewy body diseases with and without dementia to decode disease heterogeneity by investigating the genetic drivers of dementia in Lewy body diseases. We found that risk allele rs429358 tagging APOEe4 increases the odds of developing dementia, and that rs7668531 near the MMRN1 and SNCA-AS1 genes and an intronic variant rs17442721 tagging LRRK2 G2019S on chromosome 12 are protective against dementia. These results should be validated in autopsy-confirmed cases in future studies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.048
Threshold uncertainty score0.213

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.033
GPT teacher head0.302
Teacher spread0.269 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations10
Published2024
Admission routes1
Has abstractyes

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