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Record W4399535132 · doi:10.1038/s41467-024-49212-1

Cosmic kidney disease: an integrated pan-omic, physiological and morphological study into spaceflight-induced renal dysfunction

2024· article· en· W4399535132 on OpenAlex
Keith Siew, Kevin Nestler, Charlotte Nelson, Viola D’Ambrosio, Chutong Zhong, Zhongwang Li, Alessandra Grillo, Elizabeth R Wan, Vaksha Patel, Eliah Overbey, JangKeun Kim, Sanghee Yun, Michael Vaughan, Chris Cheshire, Laura Cubitt, Jessica Broni-Tabi, Maneera Al-Jaber, Valery Boyko, Cem Meydan, Peter Barker, Shehbeel Arif, Fatemeh Afsari, Noah Allen, Mohammed Al‐Maadheed, Selin Altınok, Nourdine Bah, Samuel Border, Amanda Brown, Keith Burling, Margareth Cheng-Campbell, Lorianna M. Colón, Lovorka Degoricija, Nichola Figg, Rebecca Finch, Jonathan Foox, Pouya Faridi, Alison J. French, Samrawit Gebre, Peter Gordon, Nadia Houerbi, Hossein Valipour Kahrood, Frederico Kiffer, Aleksandra S. Klosinska, Angela Kubik, Han-Chung Lee, Yinghui Li, Nicholas Lucarelli, Anthony L. Marullo, Irina Matei, Colleen McCann, Sayat Mimar, Ahmed M. Naglah, Jérôme Nicod, Kevin M. O’Shaughnessy, Lorraine Christine De Oliveira, Leah Oswalt, Laura Pătraș, San-Huei Lai Polo, Maria Rodríguez‐López, Candice Roufosse, Omid Sadeghi‐Alavijeh, Rebekah Sanchez‐Hodge, Anindya S. Paul, Ralf B. Schittenhelm, Annalise Schweickart, Ryan T. Scott, Terry C.C. Lim Kam Sian, Willian A. da Silveira, Hubert Slawinski, Daniel M. Snell, Julio Sosa, Amanda Saravia-Butler, Marshall Tabetah, Erwin Tanuwidjaya, Simon Walker‐Samuel, Xiaoping Yang, Yasmin Yasmin, Haijian Zhang, Jasminka Godovac‐Zimmermann, Pinaki Sarder, Lauren Sanders, Sylvain V. Costes, Robert A. A. Campbell, Fathi Karouia, Vidya Mohamed-Alis, Samuel G. Rodriques, Steven Lynham, Joel R. Steele, Sergio E. Baranzini, Hossein Fazelinia, Zhongquan Dai, Akira Uruno, Dai Shiba, Masayuki Yamamoto, Eduardo Almeida, Elizabeth A. Blaber, Jonathan C. Schisler, Amelia J. Eisch, Masafumi Muratani, Sara R. Zwart, Scott M. Smith, Jonathan M. Galazka, Christopher E. Mason, Afshin Beheshti, Stephen B. Walsh

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueNature Communications · 2024
Typearticle
Languageen
FieldMedicine
TopicSpaceflight effects on biology
Canadian institutionsUniversity Health Network
FundersNational Institute of Arthritis and Musculoskeletal and Skin DiseasesNational Institute of Diabetes and Digestive and Kidney DiseasesJapan Aerospace Exploration AgencyNational Institute of Mental HealthScience and Technology Facilities CouncilEngineering and Physical Sciences Research CouncilNational Center for Advancing Translational SciencesNational Research Foundation of KoreaMedical Research CouncilScience Mission DirectorateGastro-Intestinal Research FoundationAmes Research CenterNuclear Safety and Security CommissionNational Institutes of HealthFrancis Crick InstituteKidney Research UKUK Space AgencyNational Research FoundationNational Institute of Neurological Disorders and StrokeBritish Heart FoundationNational Institute on AgingNational Institute for Health and Care ResearchImperial College Healthcare NHS TrustCancer Research UKWellcome TrustNational Aeronautics and Space AdministrationUniversity of PennsylvaniaNational Science FoundationScience Foundation IrelandEli Lilly and CompanyNational Alliance for Research on Schizophrenia and DepressionJapan Society for the Promotion of ScienceImperial College London
KeywordsSpaceflightNephronKidneyBiologyTranscriptomePhysiologyEndocrinologyBiochemistryGenePhysics

Abstract

fetched live from OpenAlex

Missions into Deep Space are planned this decade. Yet the health consequences of exposure to microgravity and galactic cosmic radiation (GCR) over years-long missions on indispensable visceral organs such as the kidney are largely unexplored. We performed biomolecular (epigenomic, transcriptomic, proteomic, epiproteomic, metabolomic, metagenomic), clinical chemistry (electrolytes, endocrinology, biochemistry) and morphometry (histology, 3D imaging, miRNA-ISH, tissue weights) analyses using samples and datasets available from 11 spaceflight-exposed mouse and 5 human, 1 simulated microgravity rat and 4 simulated GCR-exposed mouse missions. We found that spaceflight induces: 1) renal transporter dephosphorylation which may indicate astronauts' increased risk of nephrolithiasis is in part a primary renal phenomenon rather than solely a secondary consequence of bone loss; 2) remodelling of the nephron that results in expansion of distal convoluted tubule size but loss of overall tubule density; 3) renal damage and dysfunction when exposed to a Mars roundtrip dose-equivalent of simulated GCR.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.859
Threshold uncertainty score0.961

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.352
Teacher spread0.318 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it