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Record W4400023852 · doi:10.17615/fd32-ta79

Genetic analyses of the electrocardiographic QT interval and its components identify additional loci and pathways

2024· article· en· W4400023852 on OpenAlexfundno aff
A. Uitterlinden, Massimiliano Cocca, Maria Pina Concas, T.V. Duong, L.-C. Weng, M. Gögele, A. Correa, Michele Orini, M. Waldenberger, Pengzhen Huang, C. Pattaro, L. Repetto, J.K. Kanters, M.J. Cutler, Francesco Cucca, J. Ding, David Schlessinger, Antonio De Luca, S.B. Felix, Rebecca Freudling, P.P. Pramstaller, A. Alonso, KASSERINE TAYLOR, Christina Ellervik, J.C. Bis, William J. Young, B. Mifsud, N. Grarup, A. Peters, O. Joe Hines, Laura Andreasen, Heikki V. Huikuri, M. Müller-Nurasyid, Marjo‐Riitta Järvelin, D.E. Arking, M.B. Shoemaker, Danyal S. Raza, T. Meitinger, Jie Yao, S.R. Heckbert, Victor Nauffal, M. Nauck, L.-P. Lyytikäinen, Alan Pittman, Casia Nursyifa, Farah Ahmed, K. Nikus, M.F. Lima-Costa, M.A. Ikram, Claus Graff, A. Isaacs, P.P. Mishra, B.M. Psaty, A.L.P. Ribeiro, N. Mononen, Y. Liu, U. Völker, R.D. Jackson, Sina A. Gharib, H. Lin, A.R. Baldassari, E.A. Whitsel, A.P. Reiner, R.N. Mitchell, J. Haessler, C. Fuchsberger, D.J. Porteous, Mika Kähönen, Monika Stoll, S. Kääb, A. Tinker, Giorgia Girotto, Pim van der Harst, P.D. Lambiase, J.P. Cook, P. Navarro, Kirill V. Tarasov, C. Kooperberg, K. Strauch, J.W. Jukema, P. W. Macfarlane, Stella Trompet, C.L. Avery, Eulalia Catamo, Yujie Qian, Juhani Junttila, S. Weiss, N. Hutri-Kähönen, S.A. Lubitz, D. Darbar, A. D. Richmond, C. Hayward, A.P. Morris, S. Thériault, Xia Shen, M.H. Preuss, A. De Grandi, Rustam Al‐Shahi Salman, Y. Jamshidi, C. Newton-Cheh, M. Dörr, M.F. Sinner, Mina Montasser, Stefan van Duijvenboden, E. Boerwinkle, Jonas L. Isaksen, Maryam Kavousi, H. Mei, Kristen K. Patton, Jorge H Ramírez, J.I. Rotter, M. Graff, P.B. Munroe, Najim Lahrouchi, Giulia Pelliccione, A. Campbell, Guillaume Paré, J.F. Wilson, E. Tarazona-Santos, Jeff O’Connell, T.M. Bartz, Van Duijn, B. Stricker, A.C. Morrison, Jan Walter Benjamins, A. Moscati, Patrick T. Ellinor, J.A. Kors, T. Lehtimäki, S. Aeschbacher, Niek Verweij, Rozenn N. Lemaître, L. Foco, T. Hansen, R. Noordam, D.O. Mook-Kanamori, Thiago Peixoto Leal, Xiuqing Guo, S. Liu, G. Sinagra, A. Linneberg, David Conen, H.J. Lin, H.R. Warren, J.G. Wilson, Ulrich Schotten, J.A. Brody, C. Roselli, H. Völzke, Morten S. Olesen, M.E. van den Berg, Martin J. Mangino, Lorenz Risch, L. Lind, Kenneth Rice, Philippe Froguel, C. Schurmann, K.A. Ryan, N. Sotoodehnia, Gustav Ahlberg, Massimo Mezzavilla, E.Z. Soliman, D.S. Evans, O.T. Raitakari, R.J.F. Loos, S. Padmanabhan

Bibliographic record

VenueUNC Libraries · 2024
Typearticle
Languageen
FieldMedicine
TopicCardiac electrophysiology and arrhythmias
Canadian institutionsnot available
FundersNational Institute of General Medical SciencesRegeneron PharmaceuticalsNational Institutes of HealthNovo Nordisk FondenUniversity College London Hospitals NHS Foundation TrustUppsala UniversitetMinistério da SaúdeAkademiska SjukhusetFonds de Recherche du Québec - SantéFundação de Amparo à Pesquisa do Estado de Minas GeraisNovo NordiskFinanciadora de Estudos e ProjetosNational Heart, Lung, and Blood InstituteVetenskapsrådetNederlandse Organisatie voor Wetenschappelijk OnderzoekConselho Nacional de Desenvolvimento Científico e TecnológicoZonMwEuropean CommissionQueen Mary University of LondonNational Institute for Health and Care ResearchKing's College LondonAmerican Heart AssociationMedical Research CouncilBayer
KeywordsQT intervalInterval (graph theory)BiologyEvolutionary biologyGeneticsInternal medicineMathematicsMedicineCombinatorics

Abstract

fetched live from OpenAlex

The QT interval is an electrocardiographic measure representing the sum of ventricular depolarization and repolarization, estimated by QRS duration and JT interval, respectively. QT interval abnormalities are associated with potentially fatal ventricular arrhythmia. Using genome-wide multi-ancestry analyses (>250,000 individuals) we identify 177, 156 and 121 independent loci for QT, JT and QRS, respectively, including a male-specific X-chromosome locus. Using gene-based rare-variant methods, we identify associations with Mendelian disease genes. Enrichments are observed in established pathways for QT and JT, and previously unreported genes indicated in insulin-receptor signalling and cardiac energy metabolism. In contrast for QRS, connective tissue components and processes for cell growth and extracellular matrix interactions are significantly enriched. We demonstrate polygenic risk score associations with atrial fibrillation, conduction disease and sudden cardiac death. Prioritization of druggable genes highlight potential therapeutic targets for arrhythmia. Together, these results substantially advance our understanding of the genetic architecture of ventricular depolarization and repolarization.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.840
Threshold uncertainty score0.277

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.027
GPT teacher head0.265
Teacher spread0.238 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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