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Record W4400401143 · doi:10.7191/jeslib.907

Identifying metadata commonalities across restricted health data sources: A mixed methods study exploring how to improve the discovery of and access to restricted datasets

2024· article· en· W4400401143 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueJournal of eScience Librarianship · 2024
Typearticle
Languageen
FieldSocial Sciences
TopicIntellectual Property Law
Canadian institutionsToronto Dementia Research AllianceUniversity of TorontoNational Research Council CanadaCanadian Respiratory Research NetworkUniversity of Saskatchewan
Fundersnot available
KeywordsComputer scienceChemistry

Abstract

fetched live from OpenAlex

Background: While open datasets are adopting FAIR principles to improve their discovery and use, restricted data—those only accessible via request or application—have fallen behind. Metadata is not an inherent characteristic of restricted data, which limits its ability to be found and used. To better understand discoverability and accessibility of restricted data, this study reviewed restricted health data sources to determine how they describe their datasets and access procedures, what descriptive commonalities exist across data sources, and to what extent the commonalities we found can be accommodated within existing metadata schemas. Methods: This study extracted dataset and access information provided by a sample of 48 restricted data sources, identified commonalities across these data sources to develop possible metadata elements for restricted data, and mapped these metadata elements to existing metadata schemas (e.g., DataCite) to evaluate how well they accommodate information supplied by restricted data sources. Results: Restricted data sources describe their datasets (35 commonalities) and access procedures (27 commonalities) in similar ways. Dataset descriptions aligned with existing metadata schemas, with the DDI-Lifecycle and -Codebook schemas receiving 91.4% and 85.7% exact matches respectively with the dataset elements we identified. Access procedures did not align with metadata available in existing schemas. Discussion: While descriptive dataset metadata for restricted data sources will make their data more findable, the accessibility of these datasets could be significantly improved by structured metadata capturing data access information. Presently, metadata schemas do not accommodate the level of detail restricted data sources provide about access procedures and requirements.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.012
metaresearch head score (Gemma)0.010
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Scholarly communication, Open science
Consensus categoriesScholarly communication
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Qualitative · Consensus signal: Qualitative
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.151
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0120.010
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.004
Science and technology studies0.0010.001
Scholarly communication0.0090.021
Open science0.0050.003
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.471
GPT teacher head0.487
Teacher spread0.016 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it