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Record W4400798673 · doi:10.5376/tgg.2024.15.0004

Role of Transposable Elements in the Evolution of the <i>Triticeae</i> Genome

2024· article· en· W4400798673 on OpenAlexvenueno aff
Jianhui Li, Renxiang Cai

Bibliographic record

VenueTriticeae Genomics and Genetics · 2024
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicChromosomal and Genetic Variations
Canadian institutionsnot available
Fundersnot available
KeywordsTriticeaeTransposable elementGenomeBiologyGeneticsEvolutionary biologyComputational biologyGene

Abstract

fetched live from OpenAlex

Transposable elements (TEs) are ubiquitous components of genomes and play a significant role in the evolution and diversification of the Triticeae tribe, which includes important cereal crops such as wheat, barley, and rye. This research examines the impact of TEs on Triticeae genome evolution, exploring their contribution to genome size, structure, and genetic diversity. We discuss the classification and mechanisms of TEs, focusing on their role in genome expansion, gene regulation, and the creation of new regulatory networks. Case studies in Triticeae species highlight the dynamic nature of TEs and their influence on genomic architecture and evolutionary adaptation. Advances in sequencing technologies and bioinformatics tools have enhanced our understanding of TE diversity and activity, paving the way for new discoveries and potential applications in crop improvement. This research underscores the importance of continued research into TEs to fully elucidate their roles and harness their potential for agricultural and biotechnological advancements.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.967
Threshold uncertainty score0.196

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.201
Teacher spread0.191 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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