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Record W4400833387 · doi:10.1029/2024gc011583

Interlaboratory Comparison of Branched GDGT Temperature and pH Proxies Using Soils and Lipid Extracts

2024· article· en· W4400833387 on OpenAlexaff
Cindy De Jonge, Francien Peterse, Klaas G.J. Nierop, Thomas M. Blattmann, Marcelo R. Alexandre, Salomé Ansanay-Alex, T. Al Austin, Mathieu Babin, Édouard Bard, Thorsten Bauersachs, Jerome Blewett, Brenna Boehman, Isla S. Castañeda, Junhui Chen, Martina Conti, Sergio Contreras, Julia Cordes, Nina Davtian, Bart E. van Dongen, Bella Duncan, Felix J. Elling, Valier Galy, S. Gao, Jens Hefter, Kai‐Uwe Hinrichs, Mitchell R. Helling, Mariska Hoorweg, Ellen C. Hopmans, Juzhi Hou, Yongsong Huang, Arnaud Huguet, Guodong Jia, Cornelia Karger, Brendan J. Keely, Stephanie Kusch, Hui Li, Jie Liang, Julius S. Lipp, Weiguo Liu, Hongxuan Lu, Kai Mangelsdorf, Hayley Manners, Alfredo Martinez Garcia, Guillemette Ménot, Gesine Mollenhauer, B. David A. Naafs, Sebastian Naeher, Lauren K. O’Connor, E. M. Pearce, Ann Pearson, Zhiguo Rao, Marta Rodrigo‐Gámiz, Chris Rosendahl, Frauke Rostek, Rui Bao, Prasanta Sanyal, Florence Schubotz, Wesley Scott, Rahul Sen, Appy Sluijs, Rienk H. Smittenberg, Ioana C. Stefanescu, Jia‐Tao Sun, Paul Sutton, Jess Tierney, E. Tejos, Joan Villanueva, Huanye Wang, Josef P. Werne, Masanobu Yamamoto, Huan Yang, Aifeng Zhou

Bibliographic record

VenueGeochemistry Geophysics Geosystems · 2024
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicGeology and Paleoclimatology Research
Canadian institutionsUniversité du Québec à Rimouski
FundersMinistry of Business, Innovation and EmploymentNederlandse Organisatie voor Wetenschappelijk OnderzoekVictoria UniversitySchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen ForschungVictoria University of Wellington
KeywordsSoil waterReproducibilityEnvironmental chemistryTemperature recordEnvironmental scienceSoil scienceGeologyMineralogyChemistryOceanographyChromatography

Abstract

fetched live from OpenAlex

Abstract Ratios of glycerol dialkyl glycerol tetraethers (GDGT), which are membrane lipids of bacteria and archaea, are at the base of several paleoenvironmental proxies. They are frequently applied to soils as well as lake‐ and marine sediments to generate records of past temperature and soil pH. To derive meaningful environmental information from these reconstructions, high analytical reproducibility is required. Based on submitted results by 39 laboratories from across the world, which employ a diverse range of analytical and quantification methods, we explored the reproducibility of brGDGT‐based proxies (MBT′ 5ME , IR, and #rings tetra ) measured on four soil samples and four soil lipid extracts. Correct identification and integration of 5‐ and 6‐methyl brGDGTs is a prerequisite for the robust calculation of proxy values, but this can be challenging as indicated by the large inter‐interlaboratory variation. The exclusion of statistical outliers improves the reproducibility, where the remaining uncertainty translates into a temperature offset from median proxy values of 0.3–0.9°C and a pH offset of 0.05–0.3. There is no apparent systematic impact of the extraction method and sample preparation steps on the brGDGT ratios. Although reported GDGT concentrations are generally consistent within laboratories, they vary greatly between laboratories. This large variability in brGDGT quantification may relate to variations in ionization efficiency or specific mass spectrometer settings possibly impacting the response of brGDGTs masses relative to that of the internal standard used. While ratio values of GDGT are generally comparable, quantities can currently not be compared between laboratories.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.449
Threshold uncertainty score0.740

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.267
Teacher spread0.250 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations14
Published2024
Admission routes1
Has abstractyes

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