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Record W4401116041 · doi:10.1007/s13225-024-00534-x

Taxonomic revision of Marasmius Fr. and Marasmiaceae Roze ex Kühner based on multigene phylogenetics and morphological evidence

2024· article· en· W4401116041 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueFungal Diversity · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant and Fungal Species Descriptions
Canadian institutionsUniversity of TorontoRoyal Ontario Museum
FundersNatural Sciences and Engineering Research Council of CanadaConselho Nacional de Desenvolvimento Científico e TecnológicoCoordenação de Aperfeiçoamento de Pessoal de Nível SuperiorFundação de Amparo à Pesquisa do Estado de São PauloFundação de Amparo à Pesquisa do Estado do AmazonasNational Science Foundation
KeywordsSubgenusBiologySectBotanyPhylogenetic treeCladeTaxonomy (biology)Evolutionary biologyGeneticsGene

Abstract

fetched live from OpenAlex

Many taxonomic and systematic rearrangements were proposed to Marasmius Fr. since its original concept in 1835, and since 1980 when it became the type of Marasmiaceae. These were based on morphological and/or more recently molecular phylogenetic studies. This study conducted a comprehensive taxonomic and systematic evaluation of Marasmius that benefits the whole family, implementing multilocus (SSU, LSU, ITS, rpb2 and ef1-α ) phylogenetic analyses integrated with morphological and other features. The resulting trees support (1) a Marasmiaceae clade-based circumscription within Marasmiineae, (2) a Marasmius clade-based circumscription within Marasmiaceae, and (3) a subgenus-section-subsection-series system. Two subgenera are proposed: Globulares and Marasmius . Marasmius auton. subgen. includes Crinis-eques sect. nov., sect. Marasmius , Sanguirotales sect. nov., Variabilispori sect. nov., and Sicciformes sect. nov., while Globulares subg. nov. groups sect. Globulares and sect. Sicci . Four subsections are proposed in sect. Globulares and three in sect. Marasmius and sect. Sicciformes . Seventeen series were defined in sect. Globulares and three in sect. Sicci . Selected traits were assessed for their phylogenetic signals within Marasmius , providing a robust framework for a natural system. Based on this analysis, Marasmiaceae includes Chaetocalathus , Crinipellis , Marasmius and Moniliophthora/Paramarasmius , and Campanellaceae fam. nov. includes Brunneocorticium , Campanella/Tetrapyrgos , Neocampanella , and Marasmiellus sect. Candidi . New species, names, combinations and epitypes are also proposed.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.767
Threshold uncertainty score0.465

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.239
Teacher spread0.205 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it