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Record W4401134132 · doi:10.1063/5.0216776

<tt>GBasis</tt>: A Python library for evaluating functions, functionals, and integrals expressed with Gaussian basis functions

2024· article· en· W4401134132 on OpenAlexafffund
Taewon David Kim, Leila Pujal, Michelle Richer, Maximilian van Zyl, Marco Martínez González, Alireza Tehrani, Valerii Chuiko, Gabriela Sánchez‐Díaz, Wesley Sanchez, William Adams, Xiaomin Huang, Braden Kelly, Esteban Vöhringer‐Martinez, Toon Verstraelen, Farnaz Heidar‐Zadeh, Paul W. Ayers

Bibliographic record

VenueThe Journal of Chemical Physics · 2024
Typearticle
Languageen
FieldPhysics and Astronomy
TopicAdvanced Chemical Physics Studies
Canadian institutionsQueen's UniversityMcMaster University
FundersFondo Nacional de Desarrollo Científico y TecnológicoComisión Nacional de Investigación Científica y TecnológicaVlaams Supercomputer CentrumFonds Wetenschappelijk OnderzoekBijzonder Onderzoeksfonds UGentQueen's UniversityCanada Research ChairsNatural Sciences and Engineering Research Council of CanadaVlaamse regeringUniversiteit GentEuropean CommissionMax-Planck-GesellschaftCompute CanadaCanarie
KeywordsPython (programming language)GaussianComputationComputer scienceBasis functionTheoretical computer scienceBasis (linear algebra)Computational scienceAlgorithmProgramming languagePhysicsMathematicsQuantum mechanics

Abstract

fetched live from OpenAlex

GBasis is a free and open-source Python library for molecular property computations based on Gaussian basis functions in quantum chemistry. Specifically, GBasis allows one to evaluate functions expanded in Gaussian basis functions (including molecular orbitals, electron density, and reduced density matrices) and to compute functionals of Gaussian basis functions (overlap integrals, one-electron integrals, and two-electron integrals). Unique features of GBasis include supporting evaluation and analytical integration of arbitrary-order derivatives of the density (matrices), computation of a broad range of (screened) Coulomb interactions, and evaluation of overlap integrals of arbitrary numbers of Gaussians in arbitrarily high dimensions. For circumstances where the flexibility of GBasis is less important than high performance, a seamless Python interface to the Libcint C package is provided. GBasis is designed to be easy to use, maintain, and extend following many standards of sustainable software development, including code-quality assurance through continuous integration protocols, extensive testing, comprehensive documentation, up-to-date package management, and continuous delivery. This article marks the official release of the GBasis library, outlining its features, examples, and development.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.545
Threshold uncertainty score0.665

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.282
Teacher spread0.258 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations23
Published2024
Admission routes2
Has abstractyes

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