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Record W4401707532 · doi:10.2478/ahem-2004-0007

Blood metabolites as predictors of skin cancer risk: a comprehensive analysis

2024· article· en· W4401707532 on OpenAlexaboutno aff
Kaymin Wu, Youwu He, Ailian Hua, Yi Yao

Bibliographic record

VenuePostępy Higieny i Medycyny Doświadczalnej · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic Associations and Epidemiology
Canadian institutionsnot available
Fundersnot available
KeywordsMendelian randomizationGenome-wide association studyMedicineOncologyInternal medicineCancerMetaboliteSkin cancerMetabolomeDiseaseMetabolomicsBioinformaticsBiologyGeneticsSingle-nucleotide polymorphismGenotypeGenetic variantsGene

Abstract

fetched live from OpenAlex

Abstract Introduction This study aimed to investigate the potential causal effects of plasma metabolites on skin cancer (SC) risk through a two-sample Mendelian randomization (MR) analysis. Skin cancer, including melanoma and non-melanoma types, is a prevalent malignancy worldwide, necessitating the identification of novel biomarkers for early detection and prevention. Materials and Methods We utilized genome-wide association study (GWAS) data from 8,299 individuals of European ancestry in the Canadian Longitudinal Study of Aging (CLSA) cohort, encompassing 1,400 metabolites. The analysis also incorporated GWAS data from FinnGen, including 20,951 SC patients and 287,137 controls of European ancestry. The association between metabolites and SC risk was assessed using the inverse-variance weighted (IVW) method, complemented by sensitivity analyses such as MR-Egger and MR-PRESSO tests. Results The results revealed significant associations between 78 unique metabolites and SC risk. Among these, 42 metabolites were associated with a significant increase in SC risk, while 36 metabolites were linked to a significant reduction in SC risk. Conclusions This study highlights novel blood metabolites that are closely related to SC risk, emphasizing their potential importance in prioritizing metabolic features for SC mechanistic research. Further evaluation of these metabolites in SC risk assessment could lead to new insights into SC prevention and treatment strategies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0020.003
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.283
Teacher spread0.275 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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