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Record W4401731654 · doi:10.1007/s10592-024-01632-8

DNA-based studies and genetic diversity indicator assessments are complementary approaches to conserving evolutionary potential

2024· article· en· W4401731654 on OpenAlexaff
Sean Hoban, Ivan Paz‐Vinas, Robyn E. Shaw, Luis Castillo‐Reina, Jessica M. da Silva, J. Andrew DeWoody, Robert Ekblom, Ancuța Fedorca, Brenna R. Forester, W. Chris Funk, Julia C. Geue, Myriam Heuertz, Peter M. Hollingsworth, Alice C. Hughes, Margaret E. Hunter, Christina Hvilsom, Fumiko Ishihama, Rebecca Jordan, Belma Kalamujić Stroil, Francine Kershaw, Colin K. Khoury, Viktoria Köppä, Linda Laikre, Anna J. MacDonald, Alicia Mastretta‐Yanes, Mariah H. Meek, Joachim Mergeay, Katie L. Millette, David O’Brien, Víctor J. Rincón-Parra, Maria Rodriguez‐Morales, Meredith C. Schuman, Gernot Segelbacher, Paul Sunnucks, Rebecca S. Taylor, Henrik Thurfjell, Cristiano Vernesi, Catherine E. Grueber

Bibliographic record

VenueConservation Genetics · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsEnvironment and Climate Change CanadaMcGill UniversityTrent University
FundersUniversity of Sydney
KeywordsGenetic diversityBiologyConservation geneticsGenetic erosionBiodiversityPopulationGenetic variationEvolutionary biologyEcologyGeneticsMicrosatelliteGeneAllele

Abstract

fetched live from OpenAlex

Abstract Genetic diversity is essential for maintaining healthy populations and ecosystems. Several approaches have recently been developed to evaluate population genetic trends without necessarily collecting new genetic data. Such “genetic diversity indicators” enable rapid, large-scale evaluation across dozens to thousands of species. Empirical genetic studies, when available, provide detailed information that is important for management, such as estimates of gene flow, inbreeding, genetic erosion and adaptation. In this article, we argue that the development and advancement of genetic diversity indicators is a complementary approach to genetic studies in conservation biology, but not a substitute. Genetic diversity indicators and empirical genetic data can provide different information for conserving genetic diversity. Genetic diversity indicators enable affordable tracking, reporting, prioritization and communication, although, being proxies, do not provide comprehensive evaluation of the genetic status of a species. Conversely, genetic methods offer detailed analysis of the genetic status of a given species or population, although they remain challenging to implement for most species globally, given current capacity and resourcing. We conclude that indicators and genetic studies are both important for genetic conservation actions and recommend they be used in combination for conserving and monitoring genetic diversity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.014
metaresearch head score (Gemma)0.020
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.014
Threshold uncertainty score0.075

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0140.020
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0110.006
Science and technology studies0.0010.002
Scholarly communication0.0040.004
Open science0.0010.002
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.111
GPT teacher head0.295
Teacher spread0.184 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations29
Published2024
Admission routes1
Has abstractyes

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