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Record W4401752409 · doi:10.2138/am-2024-9457

RamanCrystalHunter: A new program and database for processing, analysis, and identification of Raman spectra

2024· article· en· W4401752409 on OpenAlexaff
Fabrizio Nestola, Q. Zhang, Maxwell C. Day, S. Lorenzon, Martha G. Pamato, Ivano Rocchetti, C. Bendazzoli, Davide Novella, C. Mazzoli, Raffaele Sassi, D. Graham Pearson, Evan M. Smith, Michael D. Scott, Anna Barbaro, Frank E. Brenker, Lisa Santello, Simone Molinari, Radek Škoda, Matteo Alvaro, Mattia Gilio, Mara Murri, Anatoly V. Kasatkin

Bibliographic record

VenueAmerican Mineralogist · 2024
Typearticle
Languageen
FieldComputer Science
TopicGeochemistry and Geologic Mapping
Canadian institutionsUniversity of Alberta
FundersUniversità degli Studi di PadovaEuropean Commission
KeywordsRaman spectroscopySoftwareSmoothingComputer scienceGraphical user interfaceData processingIdentification (biology)Computational scienceSpectral lineProcess (computing)Analytical Chemistry (journal)DatabaseChemistryOperating systemPhysicsOptics

Abstract

fetched live from OpenAlex

Abstract RamanCrystalHunter (RCH) is a new software program designed to pre-process, analyze, and identify Raman spectra by comparison with spectra in the RamanCrystalHunter Database (RCHDB). The software is free and can be downloaded from the website https://www.fabrizionestola.com/rch. RCH is characterized by a simple graphical user interface, making it suitable for both specialist and non-specialist users, and it has been developed mainly for applications in Earth Sciences (processing the spectra of minerals) but can be used to process the Raman spectra of any synthetic or natural inorganic or organic material. RCH allows users to visualize, pre-process (e.g., using smoothing, noise reduction, and baseline correction operations), and analyze (e.g., using fitting or various calculation tools) Raman spectra. Moreover, it is equipped with the RCHDB, a new database of high-quality mineral spectra that can be downloaded for free, along with the RCH program. The RCHDB contains the Raman spectra of minerals (including single- and multi-phase inclusions within mineral hosts, for example, diamonds) and related synthetic compounds, allowing for rapid and accurate identification of unknown spectra. The RCH software includes highly customizable yet efficient and user-friendly methods for processing and analysis of Raman spectra and represents a valuable contribution to the field of Raman spectroscopy, whose applications have expanded greatly in recent years, especially in Earth Sciences. Two practical examples of novel ways in which this software can be used for geoscience applications are presented.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.005
metaresearch head score (Gemma)0.009
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Software · Consensus signal: Software
Teacher disagreement score0.043
Threshold uncertainty score0.143

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0050.009
Meta-epidemiology (narrow)0.0030.002
Meta-epidemiology (broad)0.0030.002
Bibliometrics0.0080.004
Science and technology studies0.0010.001
Scholarly communication0.0040.005
Open science0.0050.005
Research integrity0.0010.003
Insufficient payload (model declined to judge)0.0430.029

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.286
Teacher spread0.274 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreSoftware

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2024
Admission routes1
Has abstractyes

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