MétaCan
Menu
← Back to cohort
Record W4401813099 · doi:10.1038/s41467-024-50873-1

Unravelling large-scale patterns and drivers of biodiversity in dry rivers

2024· article· en· W4401813099 on OpenAlexaff
Arnaud Foulquier, Thibault Datry, Roland Corti, Daniel von Schiller, Klement Tockner, Rachel Stubbington, Mark O. Gessner, Frédéric Boyer, Marc Ohlmann, Wilfried Thuiller, Delphine Rioux, Christian Miquel, Ricardo Albariño, Daniel C. Allen, Florian Altermatt, María Isabel Arce, Shai Arnon, Damien Banas, Andy Banegas‐Medina, Erin E. Beller, Melanie L. Blanchette, Joanna Blessing, Iola G. Boëchat, Kate S. Boersma, Michael T. Bogan, Núria Bonada‬‬‬‬‬‬‬‬‬‬‬, Nick Bond, Katherine Brintrup, Andreas Bruder, Ryan M. Burrows, Tommaso Cancellario, Cristina Canhoto, Stephanie M. Carlson, Núria Cid, Julien Cornut, Michaël Danger, Bianca de Freitas Terra, Anna Maria De Girolamo, Rubén del Campo, Verónica Díaz Villanueva, Fiona Dyer, Arturo Elosegi, Ricardo Figueroa, Brian Four, Sarig Gafny, Rosa Gómez, Lluís Gómez-Gener, Simone Guareschi, Björn Gücker, Jason L. Hwan, J. Iwan Jones, Patrick S. Kubheka, Alex Laini, Simone D. Langhans, B. Launay, Guillaume Le Goff, Catherine Leigh, Chelsea J. Little, Stefan Lorenz, Jonathan C. Marshall, Eduardo J. Martin Sanz, Angus R. McIntosh, Clara Mendoza‐Lera, Elisabeth I. Meyer, Marko Miliša, Musa C. Mlambo, Manuela Morais, Nabor Moya, Peter Negus, Dev Niyogi, Iluminada Pagán, Athina Papatheodoulou, Giuseppe Pappagallo, Isabel Pardo, Petr Pařil, Steffen U. Pauls, Marek Polášek, Pablo Rodríguez‐Lozano, Robert J. Rolls, Maria Mar Sánchez-Montoya, Ana Savić, Oleksandra Shumilova, Kandikere R. Sridhar, Alisha Steward, Amina Taleb, A. Uzan, Yefrin Valladares, Ross Vander Vorste, Nathan J. Waltham, Dominik Žák, Annamaria Zoppini

Bibliographic record

VenueNature Communications · 2024
Typearticle
Languageen
FieldEnvironmental Science
TopicFish Ecology and Management Studies
Canadian institutionsSimon Fraser UniversityUniversity of Windsor
FundersHorizon 2020 Framework ProgrammeGovern de les Illes BalearsGrantová Agentura České RepublikyEuropean CommissionUniversité Grenoble Alpes
KeywordsBiodiversityScale (ratio)Environmental scienceGeographyEcologyEnvironmental resource managementBiologyCartography

Abstract

fetched live from OpenAlex

More than half of the world's rivers dry up periodically, but our understanding of the biological communities in dry riverbeds remains limited. Specifically, the roles of dispersal, environmental filtering and biotic interactions in driving biodiversity in dry rivers are poorly understood. Here, we conduct a large-scale coordinated survey of patterns and drivers of biodiversity in dry riverbeds. We focus on eight major taxa, including microorganisms, invertebrates and plants: Algae, Archaea, Bacteria, Fungi, Protozoa, Arthropods, Nematodes and Streptophyta. We use environmental DNA metabarcoding to assess biodiversity in dry sediments collected over a 1-year period from 84 non-perennial rivers across 19 countries on four continents. Both direct factors, such as nutrient and carbon availability, and indirect factors such as climate influence the local biodiversity of most taxa. Limited resource availability and prolonged dry phases favor oligotrophic microbial taxa. Co-variation among taxa, particularly Bacteria, Fungi, Algae and Protozoa, explain more spatial variation in community composition than dispersal or environmental gradients. This finding suggests that biotic interactions or unmeasured ecological and evolutionary factors may strongly influence communities during dry phases, altering biodiversity responses to global changes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.002
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.240
Teacher spread0.230 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations28
Published2024
Admission routes1
Has abstractyes

Explore more

Same venueNature Communications→Same topicFish Ecology and Management Studies→French-language works237,207→