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Record W4401967695 · doi:10.26434/chemrxiv-2024-f67jg

Leveraging Flexible Pipette-based Tool Changes to Transform Liquid Handling Systems into Dual-Function Sample Preparation and Imaging Platforms

2024· preprint· en· W4401967695 on OpenAlexaff
Mohammad Nazeri, Jeffrey Watchorn, Sheldon Mei, Alex Zhang, Christine Allen, Frank Gu

Bibliographic record

VenueChemRxiv · 2024
Typepreprint
Languageen
FieldEngineering
TopicInnovative Microfluidic and Catalytic Techniques Innovation
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsModular designWorkflowPipetteComputer scienceProof of conceptRobotAutomationSelf-healing hydrogelsThroughputEmbedded systemCharacterization (materials science)NanotechnologyComputer hardwareMaterials scienceArtificial intelligenceEngineeringMechanical engineeringChemistry

Abstract

fetched live from OpenAlex

In this study, we present an advanced system that integrates simultaneous pipetting and in-situ imaging using the Opentron OT-2 liquid handling robot. This system enables real-time monitoring and characterization of dynamic processes, such as hydrogel crosslinking, without any manual intervention. The platform’s modular design maintains cost-effectiveness and high-throughput capabilities while expanding the versatility of the OT-2 robot by incorporating imaging functionalities into the experimental workflow using a pick-and-place apparatus. Due to its modular architecture, based on an OT-2 robot, the system can be adapted for a wide range of laboratory applications at an affordable cost. This real-time imaging solution offers a practical approach to laboratory automation, leading to more efficient and data-driven experimentation. Although ionically crosslinked hydrogels were used as a proof-of-concept, this platform has potential applications across various materials systems, including crystallization dynamics, polymerization kinetics, and drug delivery system development.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.254
Teacher spread0.236 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes1
Has abstractyes

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