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Abstract A067 Unlocking asparaginase resistance: MondoA's role in pediatric B-ALL's adaptation to nutrient scarcity

2024· article· en· W4402267008 on OpenAlexaffabout
Alissia Fernandes Madeira, Constantin Segner, Christian Brückner, Alisa Kolesnikova, Mansour Poorebrahim, Busheng Xue, Alexandra Sipol, Poul H. Sorensen, Julia Hauer, Stefan Burdach

Bibliographic record

VenueCancer Research · 2024
Typearticle
Languageen
FieldMedicine
TopicAcute Lymphoblastic Leukemia research
Canadian institutionsUniversity of British ColumbiaUniversity of Calgary
Fundersnot available
KeywordsNutrientResistance (ecology)MedicineAdaptation (eye)BiologyEcologyNeuroscience

Abstract

fetched live from OpenAlex

Abstract Background: MLXIP (Myc-associated factor X-like protein X-interacting protein), also known as MondoA, is a crucial metabolic sensor that we found to promote malignancy in pediatric acute lymphoblastic B-cell leukemia (B-ALL). In our group’s previous work, a link between MondoA overexpression and resistance to glutamine deprivation (GD) was observed, though the mechanisms are not yet completely understood. Aim: To further understand the behavior of leukemia cells during amino acid shortage, we conducted experiments with L-asparaginase (ASNase), an enzyme used in leukemia treatment, to deprive cells of asparagine (ASN) and, to a lesser extent, of glutamine (GLN). Methods and Results: RNA expression and proteomic analysis of MondoA knockout (MKO) revealed a downregulation of asparagine synthetase (ASNS), an enzyme crucial for ASNase sensitivity. This trend was reproducible in publicly available gene expression data of leukemic patients (UCSC Xena). Downregulated proteins involved in pyruvate metabolism as well as the Tricarboxylic acid (TCA) cycle (e.g. citrate synthase and mitochondrial aconitase) indicated an insufficient isocitrate production in MKO. Conversely, isocitrate dehydrogenases (IDH2 and IDH3) were upregulated. There was no alteration in the enzymes further along the cycle that utilize α-KG as a substrate. We measured relative cell viability of Nalm6 B-ALL cells under different metabolic and treatment conditions, as well as with the rescue substrate α-KG. MKO showed a faster loss of viability after ASNase treatment compared to MondoA-expressing cells. A similar trend was observed under glutamine deprivation (GD). As ASNS converts GLN to ASN, we assessed the effects of combined ASN and GLN starvation. Coherent with our hypothesis, MondoA sufficient cells had a strongly diminished advantage under these conditions. Notably, the addition of α-ketoglutarate (αKG) to MKO cells mitigated the effects of ASNase and GD as well as it improved cell viability in normal media. Of interest, α-KG can also be derived from glutamine through glutaminolysis. This appears to be sufficient to sustain MKO cell growth even under conditions of GD, albeit at a reduced rate. Thus, a compromised TCA cycle in MKO cells can be overcome by αKG-substitution, compensating reduced pyruvate metabolism. Conclusion: Our results demonstrate the importance of MondoA in the metabolic adaptation of leukemia cells under nutrient deprivation. The genetic inactivation of MondoA expression leads to decreased viability of the cells under metabolic stress conditions likely due to impaired ASNS expression and a disrupted TCA cycle. In perspective, these data suggest that MondoA expression could be a critical factor in determining the efficacy of L-asparaginase therapy and predicting outcomes for pediatric B-ALL patients. Citation Format: Alissia Fernandes Madeira, Constantin Segner, Christian Brückner, Alisa Kolesnikova, Mansour Poorebrahim, Busheng Xue, Alexandra Sipol, Poul Sørensen, Julia Hauer, Stefan Burdach. Unlocking asparaginase resistance: MondoA's role in pediatric B-ALL's adaptation to nutrient scarcity [abstract]. In: Proceedings of the AACR Special Conference in Cancer Research: Advances in Pediatric Cancer Research; 2024 Sep 5-8; Toronto, Ontario, Canada. Philadelphia (PA): AACR; Cancer Res 2024;84(17 Suppl):Abstract nr A067.

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How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.065
GPT teacher head0.405
Teacher spread0.340 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2024
Admission routes2
Has abstractyes

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