MétaCan
Menu
Back to cohort
Record W4402295629 · doi:10.1016/j.xcrm.2024.101729

Mother’s milk microbiota is associated with the developing gut microbial consortia in very-low-birth-weight infants

2024· article· en· W4402295629 on OpenAlexafffund
Sara Shama, Michelle R. Asbury, Alex Kiss, Nicole Bando, James Butcher, Elena M. Comelli, Julia K. Copeland, Adrianna Greco, Akash Kothari, Philip M. Sherman, Alain Stintzi, Amel Taïbi, Christopher Tomlinson, Sharon Unger, Pauline W. Wang, Deborah L. O’Connor

Bibliographic record

VenueCell Reports Medicine · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGut microbiota and health
Canadian institutionsPublic Health OntarioHospital for Sick ChildrenThe Wilson CentreUniversity of OttawaUniversity of CalgaryInstitute for Clinical Evaluative SciencesSunnybrook Health Science CentreUniversity of TorontoSickKids Foundation
FundersEunice Kennedy Shriver National Institute of Child Health and Human DevelopmentMolly Towell Perinatal Research FoundationOntario GenomicsNational Institutes of HealthHospital for Sick ChildrenUniversity of TorontoCanadian Institutes of Health ResearchGenome CanadaMinistero dello Sviluppo EconomicoKillam TrustsOntario Ministry of Economic Development and InnovationOntario Genomics Institute
KeywordsBreastfeedingGut floraColonizationInfant feedingLow birth weightAntibioticsFormula feedingBiologyBreast milkBreast feedingMedicineMicrobiologyPediatricsImmunologyPregnancy

Abstract

fetched live from OpenAlex

Mother's milk contains diverse bacterial communities, although their impact on microbial colonization in very-low-birth-weight (VLBW, <1,500 g) infants remains unknown. Here, we examine relationships between the microbiota in preterm mother's milk and the VLBW infant gut across initial hospitalization (n = 94 mother-infant dyads, 422 milk-stool pairs). Shared zero-radius operational taxonomic units (zOTUs) between milk-stool pairs account for ∼30%-40% of zOTUs in the VLBW infant's gut. We show dose-response relationships between intakes of several genera from milk and their concentrations in the infant's gut. These relationships and those related to microbial sharing change temporally and are modified by in-hospital feeding practices (especially direct breastfeeding) and maternal-infant antibiotic use. Correlations also exist between milk and stool microbial consortia, suggesting that multiple milk microbes may influence overall gut communities together. These results highlight that the mother's milk microbiota may shape the gut colonization of VLBW infants by delivering specific bacteria and through intricate microbial interactions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.564
Threshold uncertainty score0.721

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.243
Teacher spread0.235 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations17
Published2024
Admission routes2
Has abstractyes

Explore more

Same venueCell Reports MedicineSame topicGut microbiota and healthFrench-language works237,207