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Record W4402306623 · doi:10.1016/j.foodres.2024.115045

Upcycling calf cruor slaughterhouse by-product by peptic hydrolysis and identification of three novel antifungal peptides following a regression based-machine learning approach

2024· article· en· W4402306623 on OpenAlexafffund
Zain Sanchez‐Reinoso, Jacinthe Thibodeau, Juan de Toro‐Martín, Sara García-Vela, Jean-Pierre Clément, Marie‐Claude Vohl, Ismaı̈l Fliss, Laurent Bazinet

Bibliographic record

VenueFood Research International · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicProtein Hydrolysis and Bioactive Peptides
Canadian institutionsUniversité Laval
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsAntifungalIdentification (biology)Product (mathematics)HydrolysisPepticFood scienceQuality (philosophy)ChemistryPeptideSpecies identificationComputer scienceArtificial intelligenceBiochemistryMachine learningBiologyMathematicsMicrobiologyMedicineInternal medicinePhilosophyPeptic ulcerBotanyZoologyEpistemology

Abstract

fetched live from OpenAlex

• Hydrolysis of Calf-cruor followed the same enzymatic mechanisms as adult bovine hemoglobin. • Peptic hydrolysis of Calf-cruor at pH 2 and pH 3 for 180 min promoted antibacterial activity. • Peptic hydrolysis of Calf-cruor at pH 3 for 30 min promoted antifungal activity. • PLS-DA allowed the identification of antimicrobial peptides from complex solutions. • Three new antifungal peptide sequences α(47–80), β(130–145), and β(102–109) were identified. Calf cruor (C-cru) is an understudied source of antimicrobial peptides that can be used for meat product biopreservation under a circular economy framework. This study assessed the impact of pH and peptic hydrolysis duration of C-cru on the enzymatic mechanism, peptide population, and antimicrobial activities (antibacterial, antifungal, and anti-yeast). The results showed that peptic hydrolysis of C-cru has similar enzymatic mechanisms to adult bovine hemoglobin, fostering the development of a zipper mechanism at pH 2 and 3, while the one-by-one mechanism is promoted at pH 4 and 5. The antimicrobial activities suggested that peptic hydrolysis at pH 2 and 3 for 180 min fostered higher antibacterial activity, while peptic hydrolysis at pH 3 for 30 min favored both antifungal and anti-yeast activities. Furthermore, a supervised machine learning tool was applied for the first time to peptidomic data enabling the elucidation of α(47–80), β(130–145), and β(102–109) as new antifungal peptide sequences.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.098
Threshold uncertainty score0.616

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.325
Teacher spread0.291 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations8
Published2024
Admission routes2
Has abstractyes

Explore more

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