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Record W4402406740 · doi:10.1016/j.gimo.2024.101893

Identification of an intronic Alu insertion in the SYNE1 gene associated with autosomal recessive spinocerebellar ataxia type 8

2024· article· en· W4402406740 on OpenAlexaffabout
M Gagnon, Nadia Bouhamdani, Dimiter P Kolev, S. Hussain Askree, Mouna Ben Amor

Bibliographic record

VenueGenetics in Medicine Open · 2024
Typearticle
Languageen
FieldNeuroscience
TopicGenetic Neurodegenerative Diseases
Canadian institutionsVitalité Health NetworkAtlantic Cancer Research InstituteUniversité de MonctonUniversité de Sherbrooke
Fundersnot available
KeywordsGeneticsSpinocerebellar ataxiaIdentification (biology)BiologyGene

Abstract

fetched live from OpenAlex

The spectrin repeat-containing nuclear envelope protein 1 (SYNE1; HGNC:17089) gene, which is located on chromosome 6q25 and contains 146 exons, encodes protein isoforms nesprin-1 and nesprin-2, both of which are important for maintaining the structure and function of the cerebellum.1,2 Variants in SYNE1 are associated with slowly progressive cerebellar syndromes with an adult onset, including autosomal recessive cerebellar ataxia type 1 or spinocerebellar ataxia type 8 (ARCA1/ SCAR8, [OMIM: 610743]), also known as ataxia of Beauce, named after the region in Quebec, Canada, with high prevalence of the disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.218
Threshold uncertainty score0.444

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.048
GPT teacher head0.342
Teacher spread0.295 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes2
Has abstractyes

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