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Record W4402541296 · doi:10.1093/jas/skae234.208

301 Leveraging genomics to advance the breeding of Canadian livestock

2024· article· en· W4402541296 on OpenAlexaffabout
Emily M. Leishman, Ricarda E Jahnel, Alexandra Harlander, Owen W Willems, Benjamin J. Wood, Shai Barbut, Flávio S. Schenkel, F. Miglior, R. Gervais, Paul Stothard, Christine F. Baes

Bibliographic record

VenueJournal of Animal Science · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic and phenotypic traits in livestock
Canadian institutionsUniversité LavalUniversity of AlbertaUniversity of Guelph
Fundersnot available
KeywordsLivestockGenomicsGenomic selectionBiologyBiotechnologyAgricultural scienceGenomeGeneticsEcologyGeneGenotype

Abstract

fetched live from OpenAlex

Abstract Implementing breeding strategies for a more sustainable food system is one of the most pressing topics for livestock industries. Although different species face different challenges, large-scale research projects can pave the way for future opportunities in these key sectors. Herein, we present two examples (dairy and poultry) of how research projects can result in meaningful changes to commercial breeding programs. The first example is an international large-scale dairy project, which will deliver a roadmap for greenhouse gas (GHG) management using genomics and nutrition. The project aims to facilitate a 55% reduction in GHG emissions from Canadian dairy at an estimated value of $338M CAD. This systems-level approach will leverage resources developed through previous and current large-scale projects to produce accurate multi-level emission estimates and identify opportunities to mitigate enteric GHG emissions. The results of this project will provide accurate, reliable, and robust data for industry stakeholders, national policy, and GHG inventories. The second example is a research collaboration with a commercial turkey breeding company that will enable breeding strategies for long-term and sustainable genetic improvement in health traits. This project aims to reduce preslaughter mortality by 5% and condemnations due to myopathies and health issues. This reduction alone is expected to result in 7.5M kg more turkey meat at a value of $19.8M CAD. Furthermore, there is also an expected reduction of 2.3M kg of CO2 equivalent per year for each 1% livability improvement due to production efficiencies and reduced inputs wasted for more sustainable and ethical meat production. Overall, ongoing and future research initiatives will continue to deliver solutions for key Canadian livestock sectors to improve animal health and welfare as well as efficiency and sustainability. The strides made in these ongoing collaborative projects are imperative for enhancing the sustainability of animal agriculture to feed the growing population.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.972
Threshold uncertainty score0.200

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.003
Science and technology studies0.0030.001
Scholarly communication0.0020.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.259
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes2
Has abstractyes

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