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Record W4402553736 · doi:10.1016/j.gim.2024.101251

Clinical and genetic delineation of autosomal recessive and dominant ACTL6B-related developmental brain disorders

2024· article· en· W4402553736 on OpenAlexafffund
Elisa Calì, Tania Quirin, Clarissa Rocca, Stéphanie Efthymiou, Antonella Riva, Dana Marafi, Maha S. Zaki, Mohnish Suri, Roberto Domínguez, Hasnaa M. Elbendary, Shahryar Alavi, Mohamed S. Abdel‐Hamid, Heba Morsy, Frédéric Tran Mau‐Them, Mathilde Nizon, Pavel Tesner, Lukáš Ryba, Faisal Zafar, Nuzhat Rana, Nebal Waill Saadi, Zahra Firoozfar, Pınar Gençpınar, Bülent Ünay, Canan Ustun, Ange‐Line Bruel, Christine Coubes, Jennifer Stefanich, Özlem Sezer, Emanuele Agolini, Antonio Novelli, Gessica Vasco, Donatella Lettori, Mathieu Milh, Laurent Villard, Shimriet Zeidler, Henry Opperman, Vincent Strehlow, Mahmoud Y. Issa, Hebatallah El Khassab, Prem Chand, Shahnaz Ibrahim, Ali Nejad-Rashidi, Mohammad Miryounesi, Pegah Larki, Jennifer Morrison, Ingrid Cristian, Isabelle Thiffault, Nicole Bertsch, Grace Noh, John Pappas, E Morán, Nikolaos M. Marinakis, Joanne Traeger‐Synodinos, Susan Hosseini, Mohammad Reza Abbaszadegan, Roseline Caumes, Lisenka E.L.M. Vissers, Maedeh Neshatdoust, Mostafa Montazer Zohour, Elmostafa El Fahime, Christina Canavati, Lara Kamal, Moien Kanaan, Omar Askander, V. Yu. Voinova, Olga Levchenko, Shahzhad Haider, Sara Halbach, Jain Vivek, Sanjukta Tawde, Viveka Santhosh Reddy Challa, Vykuntaraju K. Gowda, Varunvenkat M. Srinivasan, Lucas Alves Victor, Benito Pinero-Banos, Jennifer Hague, Heba Ahmed Ei-Awady, Adélia Maria de Miranda Henriques‐Souza, Huma Arshad Cheema, Muhammad Nadeem Anjum, Sara Idkaidak, Firas Alqarajeh, Osama Atawneh, Hagar Mor‐Shaked, Tamar Harel, Giovanni Zifarelli, Peter Bauer, Fernando Kok, João Paulo Kitajima, Fabíola Paoli Monteiro, Juliana Alves Josahkian, Gaëtan Lesca, Nicolas Chatron, Dorothe Ville, David Murphy, Jeffrey L. Neul, Sureni V. Mullegama, Amber Begtrup, Isabella Herman, Tadahiro Mitani, Jennifer E. Posey, Chee Geap Tay, Iram Javed, Lucinda Carr, Farah Kanani, Fiona Beecroft, Hane Lee, Elsayed Abdelkreem, Milan Macek, Lúciana Mota Bispo, Marwa Abd Elmaksoud, Feyzollah Hashemi‐Gorji, Davut Pehli̇van, David J. Amor, Rami Abou Jamra, Wendy K. Chung, Eshan Karimiani Ghayoor, Philippe M. Campeau, Fowzan S. Alkuraya, Alistair T. Pagnamenta, Joseph G. Gleeson, James R. Lupski, Pasquale Striano, Andrés Moreno-De-Luca, Denis L. J. Lafontaine, Henry Houlden, Reza Maroofian

Bibliographic record

VenueGenetics in Medicine · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicChromatin Remodeling and Cancer
Canadian institutionsKingston Health Sciences CentreQueen's UniversityUniversité de MontréalCentre Hospitalier Universitaire Sainte-Justine
FundersNational Institute of Neurological Disorders and StrokeNational Human Genome Research InstituteMedical Research CouncilSchool of Medicine, University of MissouriUniversity of Chicago MedicineSeventh Framework ProgrammePerelman School of Medicine, University of PennsylvaniaVictorian Brain BankCentre de recherche du CHU Sainte-JustineFakultet Medicinskih Nauka, Univerziteta U KragujevcuUniversity of IsfahanUniversité Claude Bernard Lyon 1Radboud Universitair Medisch CentrumFaculty of Health Sciences, Queen's UniversityOxford University Hospitals NHS Foundation TrustEunice Kennedy Shriver National Institute of Child Health and Human DevelopmentNIHR Sheffield Biomedical Research CentreShahid Beheshti University of Medical SciencesNational Institute of General Medical SciencesNational and Kapodistrian University of AthensZahedan University of Medical SciencesCentre National de la Recherche ScientifiqueMashhad University of Medical SciencesGreat Ormond Street Hospital for ChildrenUniverzita Karlova v PrazeFonds De La Recherche Scientifique - FNRSIslamic Azad UniversityRadboud UniversiteitSt. George's, University of LondonInstitut National de la Santé et de la Recherche MédicaleUniversity of NottinghamRosetrees TrustUniversity of OxfordQueen's UniversityKing Faisal Specialist Hospital and Research CentreInternational Rett Syndrome FoundationGuarantors of BrainParkinson's UKNational Institute for Health and Care ResearchAlexandria UniversityOspedale Pediatrico Bambino GesùFP7 Ideas: European Research CouncilUCLH Biomedical Research CentrePirogov Russian National Research Medical UniversityUniversity of ChicagoIsfahan University of Medical SciencesMultiple System Atrophy CoalitionUniversità degli Studi di GenovaChildren's Mercy HospitalCentre Hospitalier Universitaire de NantesMurdoch Children's Research InstituteUniversity of California, San DiegoHospices Civils de LyonFriedreich's Ataxia Research AllianceNIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer ResearchMichael J. Fox Foundation for Parkinson's ResearchParkinson's FoundationNottingham University Hospitals NHS TrustKuwait UniversityMultiple System Atrophy TrustNYU Grossman School of MedicineUniversity of MissouriVanderbilt University Medical CenterUniversity College LondonUehara Memorial FoundationWellcome TrustYork UniversityHadassah Medical OrganizationNational Institutes of HealthTehran University of Medical Sciences and Health ServicesChildren’s Hospital of Wisconsin Research InstituteUniversity of PennsylvaniaNational Research CentreFidelity FoundationCerebral Palsy AllianceHebrew University of JerusalemMuscular Dystrophy AssociationVanderbilt Kennedy Center, Vanderbilt University Medical CenterVanderbilt UniversityUniversity of BaghdadEuropean Cooperation in Science and Technology
KeywordsPhenotypeGeneticsBiologyDiseaseMedicinePathologyGene

Abstract

fetched live from OpenAlex

PURPOSE: This study aims to comprehensively delineate the phenotypic spectrum of ACTL6B-related disorders, previously associated with both autosomal recessive and autosomal dominant neurodevelopmental disorders. Molecularly, the role of the nucleolar protein ACTL6B in contributing to the disease has remained unclear. METHODS: We identified 105 affected individuals, including 39 previously reported cases, and systematically analyzed detailed clinical and genetic data for all individuals. Additionally, we conducted knockdown experiments in neuronal cells to investigate the role of ACTL6B in ribosome biogenesis. RESULTS: Biallelic variants in ACTL6B are associated with severe-to-profound global developmental delay/intellectual disability, infantile intractable seizures, absent speech, autistic features, dystonia, and increased lethality. De novo monoallelic variants result in moderate-to-severe global developmental delay/intellectual disability, absent speech, and autistic features, whereas seizures and dystonia were less frequently observed. Dysmorphic facial features and brain abnormalities, including hypoplastic corpus callosum, and parenchymal volume loss/atrophy, are common findings in both groups. We reveal that in the nucleolus, ACTL6B plays a crucial role in ribosome biogenesis, particularly in pre-rRNA processing. CONCLUSION: This study provides a comprehensive characterization of the clinical spectrum of both autosomal recessive and dominant forms of ACTL6B-associated disorders. It offers a comparative analysis of their respective phenotypes provides a plausible molecular explanation and suggests their inclusion within the expanding category of "ribosomopathies."

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.571
Threshold uncertainty score0.371

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.325
Teacher spread0.312 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2024
Admission routes2
Has abstractyes

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