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Simulating open-system molecular dynamics on analog quantum computers

2025· preprint· en· W4402618610 on OpenAlexaff
V. C. Olaya-Agudelo, Christophe H. Valahu, Ryan J. MacDonell, Maverick J. Millican, Vassili G. Matsos, F. Scuccimarra, Ting Rei Tan, Ivan Kassal

Bibliographic record

VenuePhysical Review Research · 2025
Typepreprint
Languageen
FieldComputer Science
TopicQuantum Computing Algorithms and Architecture
Canadian institutionsDalhousie University
FundersArmy Research OfficeAir Force Office of Scientific ResearchOffice of Naval Research GlobalAustralian Research CouncilOffice of Naval ResearchU.S. Air ForceAustralian Government
KeywordsComputer scienceDynamics (music)Open system (computing)QuantumPhysicsQuantum mechanicsOperating systemSoftware

Abstract

fetched live from OpenAlex

Interactions of molecules with their environment influence the course and outcome of almost all chemical reactions. However, classical computers struggle to accurately simulate complicated molecule-environment interactions because of the steep growth of computational resources with both molecule size and environment complexity. Therefore, many quantum-chemical simulations are restricted to isolated molecules, whose dynamics can dramatically differ from what happens in an environment. Here, we show that analog quantum simulators can simulate open molecular systems by using the native dissipation of the simulator and injecting additional controllable dissipation. By exploiting the native dissipation to simulate the molecular dissipation—rather than seeing it as a limitation—our approach enables longer simulations of open systems than are possible for closed systems. In particular, we show that trapped-ion simulators using a mixed qudit-boson (MQB) encoding could simulate molecules in a wide range of condensed phases by implementing widely used dissipative processes within the Lindblad formalism, including pure dephasing and both electronic and vibrational relaxation. The MQB open-system simulations require significantly fewer additional quantum resources compared to both classical and digital quantum approaches.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Scholarly communication, Open science, Research integrity
Consensus categoriesOpen science
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.944
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0030.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.002
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0090.019
Research integrity0.0000.004
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.066
GPT teacher head0.430
Teacher spread0.364 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2025
Admission routes1
Has abstractyes

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