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Brain MRI Tumour Localization and Segmentation Through Deep Learning

2024· article· en· W4402727375 on OpenAlexaff
Somayeh Davar, Thomas Fevens

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldNeuroscience
TopicBrain Tumor Detection and Classification
Canadian institutionsConcordia University
Fundersnot available
KeywordsSegmentationArtificial intelligenceComputer scienceDeep learningImage segmentationMagnetic resonance imagingComputer visionRadiologyMedicine

Abstract

fetched live from OpenAlex

The segmentation of magnetic resonance imaging (MRI) is an important task in medical imaging, particularly for brain MRIs, where accurate segmentation of anatomical structures, often challenged by uneven shapes and fuzzy boundaries of tumours, is difficult to achieve. Thus, automating reliable segmentation of the region of interest (ROI) is essential in medical imaging. This work introduces an automated approach for brain tumour segmentation, leveraging a Deep Convolutional Neural Network (CNN) with a focus on effectively segmenting brain tumours within T1-weighted contrast-enhanced MRI (CE-MRI) images. The proposed method is first performed on the classified images to localize the tumour regions of interest(ROIs). In the next stage, the algorithm contours the concentrated tumour boundary for the segmentation process, which contains the network and attention module, both spatial and channel. To evaluate the overall system's performance, precision, recall, Jaccard index, and dice similarity coefficient (DSC) were calculated, where we achieved 0.8757, 0.8804, 0.8624, and 0.8995, respectively. Our approach demonstrates promising results compared to previous methods using the same database.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.007
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.288
Teacher spread0.260 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes1
Has abstractyes

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