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Record W4402963512 · doi:10.1111/1365-2435.14667

How does urbanization affect natural selection?

2024· article· en· W4402963512 on OpenAlexaff
Anne Charmantier, Tracy T. Burkhard, Laura Gervais, Charles Perrier, Albrecht I. Schulte‐Hostedde

Bibliographic record

VenueFunctional Ecology · 2024
Typearticle
Languageen
FieldEnvironmental Science
TopicWildlife Ecology and Conservation
Canadian institutionsUniversité du Québec à MontréalLaurentian University
FundersAgence Nationale de la Recherche
KeywordsBiologyAffect (linguistics)UrbanizationNatural selectionSelection (genetic algorithm)EcologyNatural (archaeology)Natural resource economicsEconomics

Abstract

fetched live from OpenAlex

Abstract Urbanization is one of the most significant contributors to the Anthropocene, and urban evolutionary ecology has become an important field of research. While it is commonly assumed that cities impose new and stronger selection, the contradictory assertion that selection may be relaxed in cities is also frequently mentioned, and overall, our understanding of the effects of urbanization on natural selection is incomplete. In this review, we first conduct a literature search to find evidence for patterns of natural selection on phenotypic traits including morphology, physiology, behaviour and life history, in urban and non‐urban populations of animals and plants. This search reveals that coefficients of natural selection in the context of urbanization are scarce ( n = 8 studies providing selection gradients/differentials that include a total of n = 200 coefficients) and a lack of standardized methods hinders quantitative comparisons across studies (e.g. with meta‐analysis). These studies, however, provide interesting insight on the agents shaping natural selection in cities and improve our mechanistic understanding of selection processes at different spatial scales. We then perform a second literature search to review genomic studies assessing selection intensity in cities, on the genome of non‐human natural populations. While this search returns 383 articles, only 34 of these truly investigate footprints of selection associated with urbanization, and only one study provides urban genetic selection coefficients. Here again, we find highly heterogeneous approaches, yet some studies provide strong evidence of genomic footprints of urban adaptation. In neither the phenotypic nor genomic literature review were we able to quantitatively assess natural selection across urban versus non‐urban habitats. Thus, we propose a roadmap of how future studies should provide standardized metrics to facilitate mega‐ or meta‐analyses and explore generalized effects of urbanization on selection. Read the free Plain Language Summary for this article on the Journal blog.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.060
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0070.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.192
Teacher spread0.187 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations23
Published2024
Admission routes1
Has abstractyes

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