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Record W4403157227 · doi:10.1002/nbm.5271

Measuring cerebral enzymatic activity, brain pH and extracranial muscle metabolism with hyperpolarized <sup>13</sup>C‐pyruvate

2024· article· en· W4403157227 on OpenAlexfundno aff
Alixander S. Khan, Mary A. McLean, Joshua Kaggie, Ines Horvat‐Menih, Tomasz Matys, Rolf F. Schulte, M. Locke, Ashley Grimmer, Pascal Wodtke, Elizabeth Latimer, Amy Frary, Martin J. Graves, Ferdia A. Gallagher

Bibliographic record

VenueNMR in Biomedicine · 2024
Typearticle
Languageen
FieldChemistry
TopicAdvanced NMR Techniques and Applications
Canadian institutionsnot available
FundersNIHR Cambridge Biomedical Research CentreAddenbrooke's Charitable Trust, Cambridge University HospitalsGates Cambridge TrustCanadian Institute for Advanced ResearchCancer Research UKEvelyn TrustCambridge TrustWellcome TrustMultiple Sclerosis SocietyCRUK and EPSRC Cancer Imaging Centre in Cambridge and ManchesterNational Institute for Health and Care ResearchH. Lundbeck A/SLundbeckfonden
KeywordsPyruvate carboxylasePyruvate dehydrogenase complexChemistryCitrate synthaseBicarbonatePyruvic acidPyruvate decarboxylationAlaninePyruvate dehydrogenase phosphataseLactate dehydrogenaseNuclear magnetic resonanceBiochemistryEnzymeAmino acid

Abstract

fetched live from OpenAlex

Abstract Hyperpolarized carbon‐13 ( 13 C) magnetic resonance imaging (MRI) has shown promise for non‐invasive assessment of the cerebral metabolism of [1‐ 13 C]pyruvate in both healthy volunteers and patients. The exchange of pyruvate to lactate catalysed by lactate dehydrogenase (LDH) and that of pyruvate flux to bicarbonate through pyruvate dehydrogenase (PDH) are the most widely studied reactions in vivo. Here we show the potential of the technique to probe additional enzymatic activity within the brain. Approximately 50 s after intravenous injection of hyperpolarized pyruvate, high‐flip‐angle pulses were used to detect cerebral 13 C‐labelled carbon dioxide ( 13 CO 2 ), in addition to the 13 C‐bicarbonate (H 13 CO 3 − ) subsequently formed by carbonic anhydrase (CA). Brain pH measurements, which were weighted towards the extracellular compartment, were calculated from the ratio of H 13 CO 3 − to 13 CO 2 in seven volunteers using the Henderson–Hasselbalch equation, demonstrating an average pH ± SD of 7.40 ± 0.02, with inter‐observer reproducibility of 0.04. In addition, hyperpolarized [1‐ 13 C]aspartate was also detected, demonstrating irreversible pyruvate carboxylation to oxaloacetate by pyruvate carboxylase (PC) and subsequent transamination by aspartate aminotransferase (AST), with the average flux being on average 11% ± 3% of that through PDH. A hyperpolarized [1‐ 13 C]alanine signal was also detected, but this was localized to extracranial muscle tissue in keeping with skeletal alanine aminotransferase (ALT) activity. The results demonstrate the potential of hyperpolarized 13 C‐MRI to assess cerebral and extracerebral [1‐ 13 C]pyruvate metabolism in addition to LDH and PDH activity. Non‐invasive measurements of brain pH could be particularly important in assessing cerebral pathology given the wide range of disease processes that alter acid–base balance.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.574
Threshold uncertainty score0.811

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.269
Teacher spread0.249 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2024
Admission routes1
Has abstractyes

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