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Record W4403186652 · doi:10.1038/s41537-024-00505-w

Multivariable prediction of functional outcome after first-episode psychosis: a crossover validation approach in EUFEST and PSYSCAN

2024· article· en· W4403186652 on OpenAlex
Margot I. E. Slot, Maria F. Urquijo Castro, Inge Winter van Rossum, Hendrika H. van Hell, Dominic Dwyer, Paola Dazzan, A. Ter Maat, Lieuwe de Haan, Benedicto Crespo‐Facorro, Birte Glenthøj, Stephen M. Lawrie, Colm McDonald, Oliver Gruber, Celso Arango, Tilo Kircher, Barnaby Nelson, Silvana Galderisi, Mark Weiser, Gabriele Sachs, Matthias Kirschner, Stefania Tognin, Paolo Fusar‐Poli, Matthew J. Kempton, Alexis E. Cullen, Gemma Modinos, Kate Merritt, Andrea Mechelli, George Gifford, Natalia Petros, Mathilde Antoniades, Andrea De Micheli, Sandra Vieira, Zhaoying Yu, Dominic Oliver, Fiona Coutts, Emily Hird, Helen Baldwin, René S. Kahn, Erika van Hell, Inge Winter, Frederike Schirmbeck, Diana Tordesillas‐Gutiérrez, Esther Setién‐Suero, Rosa Ayesa‐Arriola, Paula Suárez‐Pinilla, Víctor Ortiz‐García de la Foz, Mikkel Sørensen, Bjørn H. Ebdrup, Jayachandra M. Raghava, Egill Rostrup, Brian Hallahan, Dara M. Cannon, James McLoughlin, Martha Finnegan, Anja Richter, Bernd Krämer, Bea Campforts, Machteld Marcelis, Claudia Vingerhoets, Covadonga M. Díaz‐Caneja, Miriam Ayora, Joost Janssen, Mara Parellada, Jessica Merchán‐Naranjo, Roberto Rodríguez–Jiménez, Marina Díaz‐Marsá, Irina Falkenberg, Florian Bitsch, Jens Sommer, Patrick D. McGorry, G. Paul Amminger, Christos Pantelis, Meredith McHugh, Jessica Spark, Armida Mucci, Paola Bucci, Giuseppe Piegari, Daria Pietrafesa, Alessia Nicita, Sara Patriarca, Linda Levi, Yoav Domany, Matthäus Willeit, Marcena Lenczowska, U Sauerzopf, Ana Weidenauer, Julia Furtner, Daniela Prayer, Anke Maatz, Achim Burrer, Philipp Stämpfli, Naemi Huber, Stefan Kaiser, Wolfram Kawohl, Rodrigo A. Bressan, André Zugman, Ary Gadelha, Graccielle R. Cunha, Jun Soo Kwon, Kang Ik Kevin Cho, Tae Young Lee, Minah Kim, Sun-Young Moon, Silvia Kyungjin Lho, Romina Mizrahi, Michael Kiang, Cory Gerritsen, Margaret Maheandiran, Sarah Ahmed, Ivana Prce, Jenny Lepock, W.W. Fleischhacker, Nikolaos Koutsouleris

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueSchizophrenia · 2024
Typearticle
Languageen
FieldMedicine
TopicSchizophrenia research and treatment
Canadian institutionsUniversity of TorontoCentre for Addiction and Mental HealthCanada Research ChairsMcGill University
FundersEuropean CommissionSanofiAstraZenecaPfizer
KeywordsContext (archaeology)Global Assessment of FunctioningMultivariate statisticsCross-validationOutcome (game theory)Support vector machinePredictive modellingMultivariate analysisMachine learningSchizophrenia (object-oriented programming)Artificial intelligenceComputer scienceMedicinePsychologyPsychiatryMathematicsGeography

Abstract

fetched live from OpenAlex

Several multivariate prognostic models have been published to predict outcomes in patients with first episode psychosis (FEP), but it remains unclear whether those predictions generalize to independent populations. Using a subset of demographic and clinical baseline predictors, we aimed to develop and externally validate different models predicting functional outcome after a FEP in the context of a schizophrenia-spectrum disorder (FES), based on a previously published cross-validation and machine learning pipeline. A crossover validation approach was adopted in two large, international cohorts (EUFEST, n = 338, and the PSYSCAN FES cohort, n = 226). Scores on the Global Assessment of Functioning scale (GAF) at 12 month follow-up were dichotomized to differentiate between poor (GAF current < 65) and good outcome (GAF current ≥ 65). Pooled non-linear support vector machine (SVM) classifiers trained on the separate cohorts identified patients with a poor outcome with cross-validated balanced accuracies (BAC) of 65-66%, but BAC dropped substantially when the models were applied to patients from a different FES cohort (BAC = 50-56%). A leave-site-out analysis on the merged sample yielded better performance (BAC = 72%), highlighting the effect of combining data from different study designs to overcome calibration issues and improve model transportability. In conclusion, our results indicate that validation of prediction models in an independent sample is essential in assessing the true value of the model. Future external validation studies, as well as attempts to harmonize data collection across studies, are recommended.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.012
Threshold uncertainty score0.658

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.293
Teacher spread0.263 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it