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Record W4403231568 · doi:10.1080/00032719.2024.2409786

Responses to Herbal Compounds in Brain Cancer Cells: two Cell-Calcium Assays and a Molecular Docking Computation Study

2024· article· en· W4403231568 on OpenAlexafffund
Natali Pflaum-Jaeger, Bardia Shahbod, Abolfazl Rahimi, Paul C. H. Li

Bibliographic record

VenueAnalytical Letters · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCurcumin's Biomedical Applications
Canadian institutionsSimon Fraser University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsChemistryDocking (animal)CalciumBrain CellCellPharmacologyBiochemistryComputational biologyTraditional medicineNeuroscienceOrganic chemistryPsychology

Abstract

fetched live from OpenAlex

Herbal plant secondary metabolites such as curcumin, resveratrol, and capsaicin are becoming increasingly popular as natural remedies. These herbal compounds are also known to act on the calcium signaling pathways, and therefore cell calcium assays can be used to study the relative interactions of these compounds with cellular receptors pertaining to natural remedies. To investigate this, Fluo-4, a fluorophore that specifically binds to Ca2+, was used to detect the increase in calcium signaling in human glioblastoma cells treated with curcumin, resveratrol, and capsaicin. The human cells used are U87 MG cells which expresses TRPV1, a pain receptor on the cell membrane. The increases of the fluorescence intensity in the cells treated with the three herbal compounds were measured using a bulk microplate assay, which generates data in a high throughput, and a microfluidic single-cell assay, which allows for the observation of the cell calcium changes in real-time. It was found that all three compounds would increase the intracellular Ca2+ concentrations on the two assays, with curcumin generating the highest increase, which confirms the greatest responses elicited by this herbal compound from the cell. Furthermore, the data obtained by a molecular docking computation study, which has been used to determine the binding affinities of the three compounds with the TRPV1 receptor, corroborate with the experimental finding of the highest cellular response due to curcumin.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.454
Threshold uncertainty score0.568

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.340
Teacher spread0.323 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes2
Has abstractyes

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