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Record W4403302285 · doi:10.3390/synbio2040022

Membrane Engineering for Carotenoid Production in Escherichia coli

2024· article· en· W4403302285 on OpenAlexafffund
J. Li, Eileen Bates, Dylan Perera, Andreea M. Palage, Valerie C. A. Ward

Bibliographic record

VenueSynBio · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPhotosynthetic Processes and Mechanisms
Canadian institutionsUniversity of GuelphUniversity of Waterloo
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsEscherichia coliCarotenoidProduction (economics)Metabolic engineeringFood scienceChemistryBiochemical engineeringBiochemistryEngineeringGeneEconomics

Abstract

fetched live from OpenAlex

Carotenoids are a class of highly hydrophobic compounds synthesized by plants in limited quantities. This study explores the potential for increasing the production yield of lycopene, a typical carotenoid compound, through engineered Escherichia coli. Given that lycopene biosynthesis occurs within microbial hosts and it is subsequently stored within lipid membranes, this study focuses on the impact of inducing membrane vesicles on lycopene yield by expressing monoglycosyldiacylglycerol synthase (MGS) or diglucosyldiacylglycerol synthase (DGS) from Acholeplasma laidlawii and inserting the upstream isopentenol utilization pathway (IUP) into the chromosome. The effect of MGS and DGS on lipid production in the cell was quantified. The results show that inserting the IUP into the chromosome increased the specific lycopene yield by 2.1-fold compared to the plasmid-based system when using a PproD constitutive promoter and by 2.0-fold when using the inducible Ptrc promoter. The expression of MGS and DGS resulted in a small increase of 31% and 33% (w/w) lipid content, respectively. When expressed in lycopene producing strains, the lycopene content decreased in the IUP strains but increased in the negative control strain expressing only the native MEP pathway from undetectable levels to 0.34 ± 0.08 mg/g.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.224
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2024
Admission routes2
Has abstractyes

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