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Record W4403595969 · doi:10.1101/2024.10.21.618803

Cooperative motility emerges in crowds of T cells but not neutrophils

2024· preprint· en· W4403595969 on OpenAlexaff
Inge M. N. Wortel, Jérémy Postat, Mihaela Mihaylova, Mauricio Merino, Aanya Bhagrath, Lin Wouters, Lucas E. Wiebke, Daniel R. Parisi, Judith N. Mandl, Johannes Textor

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2024
Typepreprint
Languageen
FieldImmunology and Microbiology
TopicImmune cells in cancer
Canadian institutionsMcGill University
FundersRadboud Universitair Medisch CentrumNederlandse Organisatie voor Wetenschappelijk Onderzoek
KeywordsCrowdsMotilityCell biologyBiologyComputer scienceComputer security

Abstract

fetched live from OpenAlex

Abstract Interacting, self-propelled particles are prone to jamming when crowded. This well-described phenomenon is shared by diverse systems including cars, animal colonies, and pedestrians. T cells, essential effectors of adaptive immunity, seemingly defy this principle: the rapid migration enabling their protective function persists even in tightly packed tissue environments – from the thymus where T cells develop, to lymphoid organs they survey for antigen, to tissues they clear from infection. Here we studied T cell crowds by combining experiments of T cells migrating in microfluidic devices with in silico models. We observed that while single T cells are highly heterogeneous in their motility, in crowds they synchronized their speeds and formed stable, motile trains. Our models showed that the emergence of this flocking-like behavior can be explained by a combination of two interaction mechanisms at the cell-cell interface: adhesion maintains cohesive T cell groups, and force transmission accelerates slower cells. Not all immune cells flock when they are crowded: neutrophils in the same settings slowed down with increasing cell density. Thus, cooperative motion may enable T cells to remain motile in densely packed tissue environments, preventing jams that curtail the motion of other crowded systems.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.228
Teacher spread0.215 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes1
Has abstractyes

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