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Record W4403636872 · doi:10.1093/biosci/biae097

Software codesign between end users and developers to enhance utility for biodiversity conservation

2024· article· en· W4403636872 on OpenAlexafffund
Mary E. Blair, Elkin A. Noguera‐Urbano, José Manuel Ochoa-Quintero, Andrea Paz, Cristina López‐Gallego, María Ángela Echeverry-Gálvis, Juan Zuloaga, Pilar Rodríguez, Leonardo Lemus-Mejía, Peter J. Ersts, Daniel López-Lozano, Matthew E. Aiello‐Lammens, H. Arango, Leonardo Buitrago, Samuel Chang Triguero, Cristian A. Cruz-Rodríguez, Juan F. Díaz‐Nieto, Dairo Escobar, Valentina Grisales‐Betancur, Bethany A. Johnson, Jamie M. Kass, María Cecilia Londoño, Cory Merow, Carlos J Muñoz-Rodríguez, María Helena Olaya-Rodríguez, Juan Luis Parra Vergara, Gonzalo E. Pinilla‐Buitrago, Nicolette S. Roach, Octavio Rojas‐Soto, Néstor Roncancio-Duque, Erika Suárez-Valencia, J. Nicolás Urbina‐Cardona, Jorge Velásquez‐Tibatá, Camilo A Zapata-Martinez, Robert P. Anderson

Bibliographic record

VenueBioScience · 2024
Typearticle
Languageen
FieldEnvironmental Science
TopicSpecies Distribution and Climate Change
Canadian institutionsUniversité de MontréalMcGill University
FundersLiber Ero FoundationComisión Nacional para el Conocimiento y Uso de la Biodiversidad, Gobierno de MéxicoNuclear Safety and Security CommissionUniversidad Nacional de ColombiaMcGill UniversityTemple UniversityUniversidad de AntioquiaUniversidad EAFITWildlife Conservation SocietyUniversidad del ValleNational Aeronautics and Space AdministrationPontificia Universidad JaverianaNational Science Foundation
KeywordsAgile software developmentConceptualizationCitizen journalismComputer scienceSoftwareProcess (computing)Process managementKnowledge managementManagement scienceSoftware engineeringEngineeringWorld Wide Web

Abstract

fetched live from OpenAlex

Creating software tools that address the needs of a wide range of decision-makers requires the inclusion of differing perspectives throughout the development process. Software tools for biodiversity conservation often fall short in this regard, partly because broad decision-maker needs may exceed the toolkits of single research groups or even institutions. We show that participatory, collaborative codesign enhances the utility of software tools for better decision-making in biodiversity conservation planning, as demonstrated by our experiences developing a set of integrated tools in Colombia. Specifically, we undertook an interdisciplinary, multi-institutional collaboration of ecological modelers, software engineers, and a diverse profile of potential end users, including decision-makers, conservation practitioners, and biodiversity experts. We leveraged and modified common paradigms of software production, including codesign and agile development, to facilitate collaboration through all stages (including conceptualization, development, testing, and feedback) to ensure the accessibility and applicability of the new tools to inform decision-making for biodiversity conservation planning.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.074
metaresearch head score (Gemma)0.259
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.074
Threshold uncertainty score0.389

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0740.259
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0040.002
Science and technology studies0.0040.006
Scholarly communication0.0090.013
Open science0.0040.021
Research integrity0.0030.007
Insufficient payload (model declined to judge)0.0070.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.060
GPT teacher head0.290
Teacher spread0.230 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes2
Has abstractyes

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