MétaCan
Menu
Back to cohort
Record W4403702967 · doi:10.1093/molbev/msae158

The Population History of Domestic Sheep Revealed by Paleogenomes

2024· article· en· W4403702967 on OpenAlexaff
Damla Kaptan, Gözde Atağ, Kıvılcım Başak Vural, Pedro Morell Miranda, Ali Akbaba, Eren Yüncü, Aleksey Buluktaev, Mohammad Foad Abazari, Sevgi Yorulmaz, Duygu Deniz Kazancı, Ayça Küçükakdağ Doğu, Yasin Gökhan Çakan, Rana Özbal, Fokke Gerritsen, Bea De Cupere, Refik Duru, Gülsün Umurtak, Benjamin S. Arbuckle, Douglas Baird, Özlem Çevik, Erhan Bıçakçı, Can Yümni Gündem, Evangelia Pişkin, Lamys Hachem, Kayra Canpolat, Zohre Fakhari, Maria A. Ochir-Goryaeva, Viktoria V. Kukanova, Hamid Reza Valipour, Javad Hosseinzadeh, Fatma Küçük Baloğlu, Anders Götherström, Eleftherios Hadjisterkotis, Thierry Grange, Eva-María Geigl, İnci̇ Togan, Torsten Günther, Mehmet Somel, Füsun Özer

Bibliographic record

VenueMolecular Biology and Evolution · 2024
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicArchaeology and ancient environmental studies
Canadian institutionsUniversity of VictoriaUniversity of British Columbia
FundersNational Science Foundation of Sri LankaUniversity of North Carolina at Chapel HillFondation pour la Recherche MédicaleUniversité Paris DiderotHorizon 2020 Framework ProgrammeNorges ForskningsrådEuropean Research CouncilGovernment Council on Grants, Russian FederationHacettepe ÜniversitesiCentre National de la Recherche ScientifiqueNational Science FoundationMegagrantsVetenskapsrådetHarvard UniversitySvenska Forskningsrådet Formas
KeywordsDomesticationBronze AgeChalcolithicSteppeGeographyPopulationMiddle EastAncient historyBiologyArchaeologyDemographyEcologyHistory

Abstract

fetched live from OpenAlex

Sheep was one of the first domesticated animals in Neolithic West Eurasia. The zooarchaeological record suggests that domestication first took place in Southwest Asia, although much remains unresolved about the precise location(s) and timing(s) of earliest domestication, or the post-domestication history of sheep. Here, we present 24 new partial sheep paleogenomes, including a 13,000-year-old Epipaleolithic Central Anatolian wild sheep, as well as 14 domestic sheep from Neolithic Anatolia, two from Neolithic Iran, two from Neolithic Iberia, three from Neolithic France, and one each from Late Neolithic/Bronze Age Baltic and South Russia, in addition to five present-day Central Anatolian Mouflons and two present-day Cyprian Mouflons. We find that Neolithic European, as well as domestic sheep breeds, are genetically closer to the Anatolian Epipaleolithic sheep and the present-day Anatolian and Cyprian Mouflon than to the Iranian Mouflon. This supports a Central Anatolian source for domestication, presenting strong evidence for a domestication event in SW Asia outside the Fertile Crescent, although we cannot rule out multiple domestication events also within the Neolithic Fertile Crescent. We further find evidence for multiple admixture and replacement events, including one that parallels the Pontic Steppe-related ancestry expansion in Europe, as well as a post-Bronze Age event that appears to have further spread Asia-related alleles across global sheep breeds. Our findings mark the dynamism of past domestic sheep populations in their potential for dispersal and admixture, sometimes being paralleled by their shepherds and in other cases not.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.167
Threshold uncertainty score0.142

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.198
Teacher spread0.194 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations29
Published2024
Admission routes1
Has abstractyes

Explore more

Same venueMolecular Biology and EvolutionSame topicArchaeology and ancient environmental studiesFrench-language works237,207