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Record W4403890080 · doi:10.1007/978-3-031-73741-1_6

From Data Science to Modular Workflows Changing Perspectives from Data to Platform: DBDIrl 1864-1922 Case Study

2024· book-chapter· en· W4403890080 on OpenAlexaff
Enda O’Shea, Marco Krumrey, Daniel Sami Mitwalli, Sebastian Teumert, Tiziana Margaria

Bibliographic record

VenueLecture notes in computer science · 2024
Typebook-chapter
Languageen
FieldDecision Sciences
TopicScientific Computing and Data Management
Canadian institutionsArtificial Intelligence in Medicine (Canada)
FundersScience Foundation Ireland
KeywordsComputer scienceWorkflowModular designData scienceSoftware engineeringDatabaseProgramming language

Abstract

fetched live from OpenAlex

Abstract Many historical data collections foot on handwritten documents and registers, whose consultation is often very difficult due to the conservation state of the physical artefacts, and whose comprehension is also made difficult by the handwriting, difficult to interpret, and the language used, different from the modern terminology. Therefore significant research efforts by historians, demographers, population health scientists and others have been started in the past with the aim of making such data collections digitally available, first on the basis of images and then as readily available repositories of transcribed data in electronically queryable formats. For the purpose of extracting data from the Irish Civil registers of deaths in the DBDIrl 1864-1922 project ( https://www.dbdirl.com ), an AI-ML Data Analytics Pipeline was proposed as a working approach validated on a subset of the data. However, the pipeline requires manual steps and it is not applicable as is on similar datasets without significant modifications to its inner workings. We are currently transforming this prototyped, single purpose product to a modular, fully automated workflow, intended to be used and reconfigured for new data in a low-code/no-code fashion by domain experts like historians. We explain our adopted analysis and refactoring process, illustrate it on part of the pipeline, including how we faced obstacles and handled pitfalls. We also evaluate its potential to become a methodical approach to transforming an interactive program to a fully automated process, in a low-code/no-code workflow style, that can be easily reused, reconfigured and extended to be able to tailor it to other datasets as needed.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.017
metaresearch head score (Gemma)0.019
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.043
Threshold uncertainty score0.087

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0170.019
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0030.004
Science and technology studies0.0040.004
Scholarly communication0.0070.006
Open science0.0030.007
Research integrity0.0020.003
Insufficient payload (model declined to judge)0.0070.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.231
GPT teacher head0.407
Teacher spread0.175 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes1
Has abstractyes

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