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Record W4403990817 · doi:10.5376/gab.2024.15.0027

Development of High-Throughput Molecular Markers for Soybean Breeding

2024· article· en· W4403990817 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueGenomics and Applied Biology · 2024
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicSoybean genetics and cultivation
Canadian institutionsnot available
Fundersnot available
KeywordsThroughputBiologyMolecular breedingBiotechnologyGeneticsComputer scienceGene

Abstract

fetched live from OpenAlex

The microbial community structure in the rice rhizosphere plays a crucial role in plant health and soil nutrient cycling throughout the growing season. This study investigates how rice plants ( Oryza sativa ) influence the microbial community in rice field soil over different growth stages. Using quantitative PCR and 16S rRNA gene pyrotag analysis, we compared the microbial communities in the rhizosphere of rice plants to those in unplanted bulk soil. Our findings indicate that the rhizosphere harbors a significantly higher abundance of 16S rRNA genes, suggesting enhanced microbial growth. The rhizosphere effect was more pronounced than temporal changes, with notable shifts in the presence of specific microbial phyla such as Gemmatimonadetes , Proteobacteria , and Verrucomicrobia . Functional groups like potential iron reducers and fermenters were enriched in the rhizosphere. Additionally, a Herbaspirillum  species was consistently more abundant in the rhizosphere, particularly during the early growth stages. These results underscore the dynamic interactions between rice plants and their associated microbial communities, highlighting the importance of the rhizosphere in shaping microbial diversity and function over the growing season.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.293
Threshold uncertainty score0.131

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.218
Teacher spread0.200 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it