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Record W4404356949 · doi:10.3389/fphot.2024.1502799

Estimating retinal blood oxygenation from diffuse reflectance spectra of semi-infinite tissue using principal component analysis

2024· article· en· W4404356949 on OpenAlexaff
Elahe Parham, Jonathan Munro, Nicolas Lapointe, Patricia Landry, Jonathan Robidoux, Danny Brouard, Mireille Quémener, Martin Parent, Dominic Sauvageau, Daniel Côté, Cléophace Akitegetse

Bibliographic record

VenueFrontiers in Photonics · 2024
Typearticle
Languageen
FieldMedicine
TopicOptical Imaging and Spectroscopy Techniques
Canadian institutionsUniversity of AlbertaHéma-QuébecUniversité Laval
Fundersnot available
KeywordsPrincipal component analysisReflectivityOxygenationDiffuse reflectionRetinalDiffuse reflectance infrared fourier transformComponent (thermodynamics)Biomedical engineeringMedicineChemistryMaterials scienceOphthalmologyInternal medicineOpticsArtificial intelligencePhysicsComputer scienceBiochemistry

Abstract

fetched live from OpenAlex

Diffuse reflectance spectroscopy (DRS) is a promising technique for non-invasive monitoring of tissue oxygen saturation (StO2). However, the interpretation of DRS data can be complicated by the presence of confounding factors such as the volume fraction of blood, tissue scattering, and lipid content which both absorb and scatter. Principal component analysis (PCA) is a multivariate statistical method that can help overcome these challenges by extracting relevant information from complex datasets and providing new dimensions used to estimate parameters such as concentrations. In this study, we present a PCA-based algorithm for estimating retinal StO2 from DRS measurements. We evaluated the performance of our algorithm using simulated data and experimental measurements on a retinal tissue phantom model. Our results show that the PCA-based algorithm can estimate the value of StO2 with a root-mean-square error of 6.38% in the presence of confounding factors. Our study demonstrates the potential of PCA as a powerful tool for extracting the concentration of components from complex DRS.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.320
Teacher spread0.305 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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