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Record W4404356949 · doi:10.3389/fphot.2024.1502799

Estimating retinal blood oxygenation from diffuse reflectance spectra of semi-infinite tissue using principal component analysis

2024· article· en· W4404356949 on OpenAlex
Elahe Parham, Jonathan Munro, Nicolas Lapointe, Patricia Landry, Jonathan Robidoux, Danny Brouard, Mireille Quémener, Martin Parent, Dominic Sauvageau, Daniel Côté, Cléophace Akitegetse

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueFrontiers in Photonics · 2024
Typearticle
Languageen
FieldMedicine
TopicOptical Imaging and Spectroscopy Techniques
Canadian institutionsUniversity of AlbertaHéma-QuébecUniversité Laval
Fundersnot available
KeywordsPrincipal component analysisReflectivityOxygenationDiffuse reflectionRetinalDiffuse reflectance infrared fourier transformComponent (thermodynamics)Biomedical engineeringMedicineChemistryMaterials scienceOphthalmologyInternal medicineOpticsArtificial intelligencePhysicsComputer scienceBiochemistry

Abstract

fetched live from OpenAlex

Diffuse reflectance spectroscopy (DRS) is a promising technique for non-invasive monitoring of tissue oxygen saturation (StO 2 ). However, the interpretation of DRS data can be complicated by the presence of confounding factors such as the volume fraction of blood, tissue scattering, and lipid content which both absorb and scatter. Principal component analysis (PCA) is a multivariate statistical method that can help overcome these challenges by extracting relevant information from complex datasets and providing new dimensions used to estimate parameters such as concentrations. In this study, we present a PCA-based algorithm for estimating retinal StO 2 from DRS measurements. We evaluated the performance of our algorithm using simulated data and experimental measurements on a retinal tissue phantom model. Our results show that the PCA-based algorithm can estimate the value of StO 2 with a root-mean-square error of 6.38% in the presence of confounding factors. Our study demonstrates the potential of PCA as a powerful tool for extracting the concentration of components from complex DRS.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.827
Threshold uncertainty score0.714

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.320
Teacher spread0.305 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it