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Record W4404716512 · doi:10.1007/s44279-024-00127-x

Molecular profiling and biochemical characterization of Brassica napus advanced lines for enhanced polyunsaturated fatty acid production

2024· article· en· W4404716512 on OpenAlexaboutno aff
Sami Ullah, Zia Ur Rehman, Cedric Mankponse Antoine Assogba, Rashid Ul Haq

Bibliographic record

VenueDiscover Agriculture · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicLipid metabolism and biosynthesis
Canadian institutionsnot available
Fundersnot available
KeywordsBrassicaPolyunsaturated fatty acidChemistryProfiling (computer programming)BiochemistryFatty acidFood scienceBiologyBotanyComputer science

Abstract

fetched live from OpenAlex

Brassica napus (rapeseed) is a globally significant oilseed crop known for its rich polyunsaturated fatty acid (PUFA) content, which is essential for human health and industrial applications. This study provides a comprehensive molecular and biochemical characterization of 45 advanced B. napus lines, using 11 simple sequence repeat (SSR) markers to explore genetic diversity and gas chromatography–mass spectrometry (GC–MS) to analyze fatty acid profiles. The seeds, derived from F6 generation crossbreeding of local and Canadian varieties with low erucic acid content, were grown under controlled conditions. Genomic DNA was extracted using a standard CTAB method and analyzed with SSR primers to detect polymorphisms associated with fatty acid synthesis. This study identified BRMS-287 as a novel, highly prevalent marker, detected in 97% of the lines, and highlighted its potential linkage to desirable oil quality traits. Conversely, BRMS-056 showed the lowest average frequency (75%). Fatty acid profiling revealed significant variation in oleic, linoleic, and linolenic acid content, with 74% of lines meeting industry standards for low saturated fatty acids (< 7%) and desirable erucic acid levels (< 5%). This research provides new insights into the genetic basis of fatty acid composition in B. napus , highlighting the potential of BRMS-287 marker for breeding programs aimed at enhancing oil quality. The findings suggest a path forward for developing B. napus lines with improved PUFA content and reduced undesirable fatty acids, which could have significant implications for health and industry.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.398

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.219
Teacher spread0.215 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2024
Admission routes1
Has abstractyes

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