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The relationship between UHRF1 and DNMT1 and the process of DNA methylation

2024· article· en· W4404728853 on OpenAlexaff
Tianning Wang

Bibliographic record

VenueTheoretical and Natural Science · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCancer-related gene regulation
Canadian institutionsEarl Haig Secondary School
Fundersnot available
KeywordsDNMT1DNA methylationDNAProcess (computing)DNA methyltransferaseComputational biologyMethylationBiologyGeneticsComputer scienceMethyltransferaseGeneGene expression

Abstract

fetched live from OpenAlex

The maintenance of normal epigenetic growth and development is crucial for various biological processes, with DNA methylation playing a significant role. The UHRF1-DNMT1 complex regulates DNA methylation, particularly in mammalian cells. This review paper explores the relationship between UHRF1, DNMT1, and DNA methylation homeostasis in cancer cells. Studies have primarily focused on human colorectal cell lines HCT116 and DLD1, shedding light on the protein stabilization of UHRF1 and DNMT1 through methylation-mediated ubiquitination. The impact of UHRF1 on DNA methylation in cancer cells is evaluated by controlling growth hormones. Furthermore, the study reveals that UHRF1 down-regulation influences DNMT1-mediated methylation on DNA and highlights the non-canonical functions of UHRF1 that significantly contribute to DNA methylation homeostasis. This review paper delves into the intricate relationship between the UHRF1-DNMT1 complex and DNA methylation homeostasis, particularly in the context of cancer cells. By examining the protein stabilization mechanisms of UHRF1 and DNMT1, as well as the regulatory role of UHRF1 in DNA methylation, this study provides valuable insights into the molecular mechanisms underlying epigenetic regulation. The findings presented in this review contribute to a better understanding of the role of UHRF1 and DNMT1 in maintaining DNA methylation patterns and highlight their potential implications in cancer biology.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.282
Teacher spread0.276 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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