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Record W4404731195 · doi:10.1101/2024.11.22.24317504

Deep learning AI and Restriction Spectrum Imaging for patient-level detection of clinically significant prostate cancer on MRI

2024· preprint· en· W4404731195 on OpenAlexaff
Yuze Song, Mariluz Rojo Domingo, Christopher C. Conlin, D. Deondre, Madison T Baxter, Anna Dornisch, George Xu, Aditya Bagrodia, Tristan Barrett, Mukesh G. Harisinghani, Gary Hollenberg, Sophia C. Kamran, Christopher J. Kane, Dimitri A. Kessler, Joshua Kuperman, Kang‐Lung Lee, Michael A. Liss, Daniel Margolis, P. Murphy, Nabih Nakrour, Truong Ngyuen, Thomas Osinski, Rebecca Rakow‐Penner, Shoumik Roychowdhury, Ahmed S Shabik, Shaun Trecarten, Natasha Wehrli, Eric Weinberg, Sean Woolen, Anders M. Dale, Tyler M. Seibert

Bibliographic record

VenuemedRxiv · 2024
Typepreprint
Languageen
FieldMedicine
TopicProstate Cancer Diagnosis and Treatment
Canadian institutionsArtificial Intelligence in Medicine (Canada)
Fundersnot available
KeywordsMedicineProstate cancerReceiver operating characteristicProstateMultiparametric MRIRadiologyCancer detectionBiopsyMagnetic resonance imagingNuclear medicineArtificial intelligenceCancerComputer scienceInternal medicine

Abstract

fetched live from OpenAlex

Abstract Background The Prostate Imaging Reporting & Data System (PI-RADS), based on multiparametric MRI (mpMRI), is widely used for the detection of clinically significant prostate cancer (csPCa, Gleason Grade Group (GG≥2)). However, its diagnostic accuracy can be impacted by variability in interpretation. Restriction Spectrum Imaging (RSI), an advanced diffusion-weighted technique, offers a standardized, quantitative approach for detecting csPCa, potentially enhancing diagnostic consistency and performing comparably to expert-level assessments. Purpose To evaluate whether combining maximum RSI-derived restriction scores (RSIrs-max) with deep learning (DL) models can enhance patient-level detection of csPCa compared to using PI-RADS or RSIrs-max alone. Materials and Methods Data from 1,892 patients across seven institutions were analyzed, selected based on MRI results and biopsy-confirmed diagnoses. Two deep learning architectures, 3D-DenseNet and 3D-DenseNet+RSI (incorporating RSIrs-max), were developed and trained using biparametric MRI (bpMRI) and RSI data across two data splits. Model performance was compared using the area under the receiver operating characteristic curve (AUC) for patient-level csPCa detection, using PI-RADS performance for clinical reference. Results Neither RSIrs-max nor the best DL model combined with RSIrs-max significantly outperformed PI-RADS interpretation by expert radiologists. However, when combined with PI-RADS, both approaches significantly improved patient-level csPCa detection, with AUCs of 0.79 (95% CI: 0.74-0.83; P =.005) for combination of RSIrs-max with PI-RADS and 0.81 (95% CI: 0.76-0.85; P <.001) for combination of best DL model with PI-RADS, compared to 0.73 (95% CI: 0.68-0.78) for PI-RADS alone. Conclusion Both RSIrs-max and DL models demonstrate comparable performance to PI-RADS alone. Integrating either model with PI-RADS significantly enhances patient-level detection of csPCa compared to using PI-RADS alone. Summary Statement RSIrs-max and deep learning models match the performance of expert PI-RADS in patient-level csPCa detection and combining either with PI-RADS yields a significant improvement over PI-RADS alone. Key Points In a study of 1,892 patients from seven institutions undergoing MRI and biopsy for prostate cancer, RSIrs-max and the DL model (AUC, 0.75 ( P =.59) and 0.78 ( P =.09)) performed comparably to expert-level PI-RADS scores (AUC, 0.73). Including prostate auto-segmentation improved the DL model (AUC, 0.68 ( P =.01) vs 0.72 ( P =.60)). Combining RSIrs-max or the DL model (AUC, 0.79 ( P =.005) and 0.81 ( P <.001)) with PI-RADS statistically significantly outperformed PI-RADS alone (AUC, 0.73).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.008
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.017

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.008
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.316
Teacher spread0.291 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations3
Published2024
Admission routes1
Has abstractyes

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