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Record W4404813907 · doi:10.1099/ijsem.0.006587

Kodamaea schenbergiae f.a., sp. nov. and Suhomyces schwaniae f.a., sp. nov., two yeast species isolated from mushrooms and associated insects in a Brazilian Amazonian rainforest biome

2024· article· en· W4404813907 on OpenAlexafffund
Rosângela Santa‐Brígida, Ana Raquel O. Santos, Marlúcia B. Martins, Luiz Henrique Rosa, Marc‐André Lachance, Carlos A. Rosa

Bibliographic record

VenueINTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicYeasts and Rust Fungi Studies
Canadian institutionsWestern University
FundersNatural Sciences and Engineering Research Council of CanadaFundação de Amparo à Pesquisa do Estado de Minas GeraisConselho Nacional de Desenvolvimento Científico e Tecnológico
KeywordsBiologyBiomeHolotypeRainforestAmazonianBotanyIntergenic regionAmazon rainforestZoologyEcologyTaxonomy (biology)GeneGeneticsEcosystem

Abstract

fetched live from OpenAlex

Thirty yeast isolates belonging to the genera Kodamaea and Suhomyces were isolated from mushrooms and associated drosophilids collected in a Brazilian Amazonian rainforest biome. Analyses of the sequences of the intergenic spacer region and the D1/D2 domains of the large subunit rRNA gene showed that these isolates represent two distinct species. The first, represented by ten isolates, is phylogenetically related to Kodamaea plutei and Kodamaea lidongshanica based on the sequences of the D1/D2 domains. The name Kodamaea schenbergiae f.a., sp. nov. (Holotype CBS 18628T; MycoBank MB855624) is proposed to accommodate the species. The second species was represented by 20 isolates (13 isolates from drosophilids and 7 from mushrooms). This novel species is phylogenetically related to Suhomyces bolitotheri, Suhomyces rilaensis and Suhomyces choctaworum. The name Suhomyces schwaniae f.a., sp. nov. (Holotype CBS 18800T; MycoBank MB855625) is proposed to accommodate the species. Both novel species did not produce asci or evidence of conjugation when cultured individually or in pairs. The isolation of these yeasts associated with mushrooms and drosophilids in the Amazonian biome suggests that these substrates are the habitat of both species.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.235
Teacher spread0.227 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes2
Has abstractyes

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