MétaCan
Menu
Back to cohort
Record W4404960204 · doi:10.1016/j.jip.2024.108239

Sequence independent immune effects of white spot syndrome virus (WSSV) dsRNA complexed with phytoglycogen nanoparticles in freshwater crayfish

2024· article· en· W4404960204 on OpenAlexafffund
Kayla A. Samms, Emma C. Monod, Aizah Ijaz, Sarah Au, Kristof Jenik, Tania Rodríguez‐Ramos, Brian Dixon, Stephanie J. DeWitte‐Orr

Bibliographic record

VenueJournal of Invertebrate Pathology · 2024
Typearticle
Languageen
FieldImmunology and Microbiology
TopicInvertebrate Immune Response Mechanisms
Canadian institutionsUniversity of WaterlooWilfrid Laurier University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsRNA silencingWhite spot syndromeBiologyInnate immune systemVirusVirologyCrayfishImmune systemRNANucleic acidRNA interferenceVirus-like particleMicrobiologyBiochemistryRecombinant DNAGeneImmunology

Abstract

fetched live from OpenAlex

White spot syndrome virus (WSSV), a double stranded (ds)DNA virus, is a pathogen that causes massive mortalities in crustaceans worldwide. The present study focuses on using dsRNA to induce sequence-independent immune responses to control virus replication. DsRNA is a well characterized innate immune stimulant in vertebrates and effectively induces an antiviral state. In crustaceans, it has been shown that dsRNA containing WSSV sequences (WSSV-dsRNA) can trigger an immune response independent of RNA interference (RNAi) to mitigate disease. We hypothesized that the potency and efficacy of dsRNA-induced immunity would be enhanced using a biodegradable, cationic phytoglycogen nanoparticle, Nanodendrix (nanoparticle; NP), to deliver the dsRNA. Two in vivo studies were conducted to test the efficacy of long dsRNA as an innate immune stimulant with or without the NP in crayfish. Long dsRNA, 360-500 bp in length, was synthesized based on two WSSV sequences, viral particle 28 (VP28) and viral particle 19 (VP19) respectively. Crayfish were injected in the ventral sinus with WSSV-dsRNA (VP28 or VP19 sequence) either in complex with the NP or alone. High molecular weight (HMW) poly inosinic: polycytidylic acid (poly IC), a synthetic viral dsRNA mimic, was used as a positive control. In the negative control groups, crayfish were injected with either phosphate buffered saline or NP alone. These studies found WSSV-dsRNA could enhance hemocyte numbers, nitric oxide levels and phenoloxidase activity. This enhancement was more effective than when using HMW poly IC. Finally, the nanoparticle did not increase dsRNA's immune activation capability, but it did reduce dsRNA's toxicity. Further studies may help determine the efficacy of these treatments as immune stimulants for preventing pathogenic outbreaks in the invertebrate aquaculture industry.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.020
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.229
Teacher spread0.217 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes2
Has abstractyes

Explore more

Same venueJournal of Invertebrate PathologySame topicInvertebrate Immune Response MechanismsFrench-language works237,207