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Record W4405098742 · doi:10.22215/etd/2024-16326

Interactions between Alpha-Synuclein Fibrils and Paraquat: Parallel Oxidative Stress and MHC-I Outcomes.

2024· dissertation· en· W4405098742 on OpenAlexaff
Spencer Shahen

Bibliographic record

Venuenot available
Typedissertation
Languageen
FieldMedicine
TopicParkinson's Disease Mechanisms and Treatments
Canadian institutionsCarleton University
Fundersnot available
KeywordsParaquatOxidative stressAlpha-synucleinOxidative phosphorylationChemistrySynucleinopathiesDopamineFibrilAlpha (finance)Cell biologyParkinson's diseaseBiophysicsBiologyNeuroscienceBiochemistryInternal medicineMedicineDisease

Abstract

fetched live from OpenAlex

Parkinson's Disease (PD) is characterized by a loss of midbrain dopamine neurons and the pathological accumulation of alpha-synuclein rich Lewy body inclusions.In particular, alphasynuclein inclusions readily accumulate in the motor cortex causing disability.Accumulating evidence indicates that misfolded alpha-synuclein fibrils can promote a neuroinflammatory environment.At the same time, oxidative stressors, such as the pesticide paraquat, have repeatedly been linked to PD.We sought to assess whether paraquat can augment the neuroinflammatory and toxic effects of exposure to alpha-synuclein preformed fibrils (PFFs).To this end, we exposed E17 primary cortical neurons to wild-type or mutant (A53T) PFFs and assessed oxidative stress (CellROX assay), total, S-129 phosphorylated, and aggregated conformations of alpha-synuclein, along with the expression of MHC-I (which is expressed on neurons and is an indicator of synaptic changes or vulnerability to inflammatory stress).Our findings demonstrated that the PFFs induced a robust increase in oxidative stress and MHC-I levels, coupled with increased alpha-synuclein accumulation.The A53T-PFFs generally had the most dramatic effects, and this was evident for all three forms of alpha-synuclein.The paraquat and alpha-synuclein PFF treatments induced additive effects on oxidative stress levels.These data suggest a potential mechanistic connection between oxidative stress, alpha-synuclein, and MHC-I, which might hold importance for the cumulative spread of PD pathology.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.333
Teacher spread0.307 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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