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Record W4405457236 · doi:10.1111/pbr.13232

Genetic Mapping of the Powdery Mildew Resistance Gene <i>Pm13</i> on Oat ( <scp> <i>Avena sativa</i> </scp> ) Chromosome 1D

2024· article· en· W4405457236 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenuePlant Breeding · 2024
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPowdery Mildew Fungal Diseases
Canadian institutionsAgriculture and Agri-Food Canada
FundersBiotechnology and Biological Sciences Research CouncilDirectorate for Biological Sciences
KeywordsPowdery mildewBiologyAvenaChromosomeGene mappingBotanyPlant disease resistanceGeneResistance (ecology)HorticultureAgronomyGenetics

Abstract

fetched live from OpenAlex

ABSTRACT Powdery mildew, caused by the biotrophic fungus Blumeria graminis DC. f. sp. avenae , is a widespread disease of oats, especially in the temperate regions of Western and Central Europe, and the use of resistant varieties is the most sustainable way to ensure stable yields. Therefore, the identification of robust and effective resistance to powdery mildew is of great interest for oat breedinpg. In contrast to race‐specific resistance genes, adult plant resistance (APR) is generally considered to be more durable. The oat variety ‘Firth’, as well as related varieties such as ‘Husky’ or ‘Flämingstip’, contains an unknown APR gene, which was previously located on chromosome 1D using DArT markers. The aim of this study was to confirm and refine the chromosomal location of this resistance gene, tentatively named Pm13 . To this end, two independent experiments were carried out using different genetic material under natural infection conditions in the field: genome‐wide association mapping (GWAS) in a diverse set of 250 oat lines grown in 10 environments and QTL mapping in a HuskyxAVE1284 biparental population grown in three environments. Both approaches identified a QTL for powdery mildew resistance on the distal end of chromosome 1D in the hexaploid Sang oat genome. The locus explained up to 15% of the phenotypic variance in GWAS and 64% of the phenotypic variance in QTL mapping. Comparison of field data with results from laboratory leaf segment tests confirmed that Pm13 does indeed confer APR. The sequence information of the identified linked markers may allow the development of molecular markers useful for early selection of oat lines with high levels of APR.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.689
Threshold uncertainty score0.404

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.194
Teacher spread0.170 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it