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Ultrasound-based geometric modeling of the human ovary with applications to cryopreservation

2024· article· en· W4405460029 on OpenAlexafffund
Rounak K. Baheti, Prem K. Solanki, S. Ahmed, Angela Baerwald, Yoed Rabin

Bibliographic record

VenueCryobiology · 2024
Typearticle
Languageen
FieldMedicine
TopicReproductive Biology and Fertility
Canadian institutionsUniversity of Saskatchewan
FundersOregon National Primate Research CenterNational Institutes of HealthUniversity of SaskatchewanDepartment of Obstetrics and Gynecology, Baylor College of Medicine
KeywordsVitrificationCryopreservationOvaryFertility preservation3D ultrasoundUltrasoundAndrologyComputer scienceFertilityBiomedical engineeringBiologyMedicineRadiologyEmbryoEndocrinologyCell biology

Abstract

fetched live from OpenAlex

Successful cryopreservation of the whole ovary outside of the body, while a woman undergoes cancer treatments, may help preserving fertility and regaining hormone balance during recovery. One of the key challenges in whole ovary cryopreservation is adequately loading the organ with cryoprotective agents (CPAs). Another notable challenge in developing the application is the lack of geometric data needed for designing matching thermal protocols. The objective of the current study is twofold: (i) to develop an effective geometric reconstruction method for the ovary, based on transvaginal ultrasound (TVUS) data, and (ii) to perform a pilot study on the thermal effects associated with CPA loading with application to vitrification. This study includes screening of 127 TVUS imaging datasets of ovaries from healthy ovulatory participants, reconstruction of 14 geometric models, and thermally analyzing two representative geometric models of low and high mature follicles-to-organ volume ratios. Results of this study demonstrate that the proposed reconstruction method is faster and more accurate than that facilitated by commercially available software (SonoAVC, GE Healthcare). Two extremes were investigated: (1) complete vitrification of the ovary, and (2) crystallization of mature follicles while the remaining ovarian stroma vitrifies. CPA loading into the mature follicles is considered an outstanding cryopreservation challenge, but with very little impact on long-term fertility preservation. Results of this study suggest that ovarian preservation by vitrification is feasible when sufficient CPA loading is achieved, while identifying the most suitable CPA for the task remains a challenge beyond the scope of the current study.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.579
Threshold uncertainty score0.170

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.045
GPT teacher head0.315
Teacher spread0.270 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes2
Has abstractyes

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