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Automatic segmentation of placenta for quantitative ultrasound analysis

2024· article· en· W4405517575 on OpenAlexaff
William Hempstead, Robert Rohling, Farah Deeba

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldMedicine
TopicPregnancy and preeclampsia studies
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsComputer scienceSegmentationPlacentaArtificial intelligenceUltrasoundImage segmentationComputer visionObstetricsPattern recognition (psychology)RadiologyPregnancyMedicineFetusBiology

Abstract

fetched live from OpenAlex

Quantitative ultrasound (QUS) holds promise for non-invasive placental tissue characterization and disease detection, yet its clinical application is hindered by the effort required for placental segmentation to identify a region-of-interest (ROI) for calculation. Manual segmentation is time-consuming and prone to variability due to the irregular boundaries of the placental tissue. This study aims to develop an automatic placental identification and segmentation model to facilitate QUS integration into clinical practice, alleviate clinician workload, and enable real-time feedback on QUS quality. We employed Mask R-CNN within the Detectron2 framework to automate placental segmentation using a dataset of 149 B-mode ultrasound images annotated by a medical image specialist (M.D.) covering various trimesters. Inference on a validation subset (30 images) yielded an average Dice Similarity Coefficient (DSC) of 0.863. Our model gave quality predictions for a majority of the test images with 57% of segmentations achieving DSC ≥ 0.85 and 40% with DSC ≥ 0.90. The model’s low inference time of approximately 55 ms per iteration supports near real-time QUS processing. Future work will focus on expanding the dataset, optimizing the loss function, and addressing edge effects on QUS to further enhance segmentation quality.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.009
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.005
Threshold uncertainty score0.017

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.009
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0000.001
Scholarly communication0.0020.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.037
GPT teacher head0.358
Teacher spread0.321 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes1
Has abstractyes

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