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BmE2F1 regulates endoreplication of silk gland cells in silkworm, Bombyx mori

2024· article· en· W4405529643 on OpenAlexaff
Linli Zhou, Shuo Liu, Chunlin Li, Wei Zhou, Fangyin Dai, Xiaoling Tong

Bibliographic record

VenueInternational Journal of Biological Macromolecules · 2024
Typearticle
Languageen
FieldMaterials Science
TopicSilk-based biomaterials and applications
Canadian institutionsMinistry of Agriculture
FundersFundamental Research Funds for the Central UniversitiesAgriculture Research System of ChinaNational Natural Science Foundation of China
KeywordsBombyx moriEndoreduplicationSILKBombyxCell biologyBiologyGeneticsCellCell cycleGeneMaterials science

Abstract

fetched live from OpenAlex

Endoreplication is particularly important in the context of silk protein synthesis within the silk gland cells of silkworms. Our previous research indicated that the BmE2F1 enhances the silk yield of silkworm cocoons, but the underlying molecular mechanism remains elusive. In this study, we employed RNA-sequencing to dissect the transcriptional profiles of silk glands in the wild-type Dazao silkworm strain and the overexpression (OE) silkworm strain with specific overexpression of the BmE2F1 gene in silk glands. Among the 1126 differentially expressed genes (DEGs), many related to DNA replication (endoreplication in silk glands of silkworm larvae) were significantly enriched. Quantitative real-time PCR confirmed that overexpression of BmE2F1 led to a substantial increase in the expression of 13 genes involved in the DNA replication pathway. Additionally, BmE2F1 upregulated the expression of BmCyclin E , a pivotal gene in the G/S phase transition. Moreover, BmE2F1 overexpression in silk glands significantly boosted DNA replication and concurrently increased the DNA content within silk glands. In conclusion, BmE2F1 regulates endoreplication in silk gland cells of silkworms through dual mechanisms: firstly, by enhancing the formation of the DNA replication complex; and secondly, by facilitating the cells' entry into the S phase. • A novel gene, BmE2F1 , regulates endoreplication in silk gland cells of silkworm. • BmE2F1 functions as a transcriptional activator of cell-cycle related genes and DNA replication genes in silk gland cells. • BmE2F1 modulates endoreplication in silk gland cells to enhance silk yields in silkworm.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.340

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.285
Teacher spread0.267 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations8
Published2024
Admission routes1
Has abstractyes

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